|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
2-1
(LD)
,
OCL10,16-3 (LD 2-1'_CRS)
(D)
,
OCL10,16-4 (LD 2-1'_P/O)
(D)
,
OCL13
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
bcsC
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
bcsC
Search strains by all related name:
bcsC b3530 ECK3515 f1166 JW5942 yhjL
|
General information (Go to Linear View: )
|
|
Gene Name
|
bcsC
|
|
Alternative name
|
b3530,ECK3515,f1166,JW5942,yhjL
|
|
Location, Length
|
3,683,723 - 3,687,196
(
-
)
;
79.40
min
;
3474
(bp) ,
1157
(aa)
|
|
Product
|
cellulose synthase subunit
|
|
Operon Name
|
bcsABZC
|
|
Note
|
putative oxidoreductase subunit
|
|
Function
|
putative enzyme; Not classified
|
|
Gene Ontology
|
GO:0005488
;
binding ( bcsC )
GO:0019867
;
outer membrane ( bcsC )
GO:0030244
;
cellulose biosynthetic process ( bcsC )
|
|
PID
|
226510983
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
BCSC_ECOLI
(
P37650
;
P76710
)
|
|
- Protein name
|
Cellulose synthase operon protein C.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=bcsC; OrderedLocusNames=b3530;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
bcsC
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Clathrin D6 Coat
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Cellulose synthase operon protein C
|
|
PSI-BLAST
|
Myosin-8
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
COG0457: FOG: TPR repeat [Escherichia coli 53638]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
GLYCOSAMINOGLYCAN
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
AMIDATION
|
| Sequences |
Amino acid
FASTA format
|
0001 MRKFTLNIFT LSLGLAVMPM VEAAPTAQQQ LLEQVRLGEA THREDLVQQS LYRLELIDPN NPDVVAARFR
0071 SLLRQGDIDG AQKQLDRLSQ LAPSSNAYKS SRTTMLLSTP DGRQALQQAR LQATTGHAEE AVASYNKLFN
0141 GAPPEGDIAV EYWSTVAKIP ARRGEAINQL KRINADAPGN TGLQNNLALL LFSSDRRDEG FAVLEQMAKS
0211 NAGREGASKI WYGQIKDMPV SDASVSALKK YLSIFSDGDS VAAAQSQLAE QQKQLADPAF RARAQGLAAV
0281 DSGMAGKAIP ELQQAVRANP KDSEALGALG QAYSQKGDRA NAVANLEKAL ALDPHSSNND KWNSLLKVNR
0351 YWLAIQQGDA ALKANNPDRA ERLFQQARNV DNTDSYAVLG LGDVAMARKD YPAAERYYQQ TLRMDSGNTN
0421 AVRGLANIYR QQSPEKAEAF IASLSASQRR SIDDIERSLQ NDRLAQQAEA LENQGKWAQA AALQRQRLAL
0491 DPGSVWITYR LSQDLWQAGQ RSQADTLMRN LAQQKSNDPE QVYAYGLYLS GHDQDRAALA HINSLPRAQW
0561 NSNIQELVNR LQSDQVLETA NRLRESGKEA EAEAMLRQQP PSTRIDLTLA DWAQQRRDYT AARAAYQNVL
0631 TREPANADAI LGLTEVDIAA GDKAAARSQL AKLPATDNAS LNTQRRVALA QAQLGDTAAA QRTFNKLIPQ
0701 AKSQPPSMES AMVLRDGAKF EAQAGDPTQA LETYKDAMVA SGVTTTRPQD NDTFTRLTRN DEKDDWLKRG
0771 VRSDAADLYR QQDLNVTLEH DYWGSSGTGG YSDLKAHTTM LQVDAPYSDG RMFFRSDFVN MNVGSFSTNA
0841 DGKWDDNWGT CTLQDCSGNR SQSDSGASVA VGWRNDVWSW DIGTTPMGFN VVDVVGGISY SDDIGPLGYT
0911 VNAHRRPISS SLLAFGGQKD SPSNTGKKWG GVRADGVGLS LSYDKGEANG VWASLSGDQL TGKNVEDNWR
0981 VRWMTGYYYK VINQNNRRVT IGLNNMIWHY DKDLSGYSLG QGGYYSPQEY LSFAIPVMWR ERTENWSWEL
1051 GASGSWSHSR TKTMPRYPLM NLIPTDWQEE AARQSNDGGS SQGFGYTARA LLERRVTSNW FVGTAIDIQQ
1121 AKDYAPSHFL LYVRYSAAGW QGDMDLPPQP LIPYADW
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 cctattacaa ctatgtgctg accctgtttg
-070 gacaaggctg ggatcaacac cgtttccgct tctcgacaaa aggtgagtta ttacctgact ggggccagga
0001 atgcgcaaat tcacactaaa catattcacg ctttccctcg gtctggccgt catgccgatg gtcgaggcag
0071 caccaaccgc tcagcaacag ttgctggagc aagttcggtt aggcgaagcg acccatcgtg aagatctggt
0141 gcaacagtcg ttatatcggc tggaacttat tgatccgaat aacccggacg tcgttgccgc ccgtttccgt
0211 tctttgttac gtcagggcga tattgatggc gcgcaaaaac agctcgatcg gctgtcgcag ttagcgccga
0281 gttcaaatgc gtataaatcg tcgcggacta cgatgctact ttccacgccg gatggtcgtc aggcactgca
0351 acaggcacga ttgcaggcga cgaccggtca tgcagaagaa gctgtggcga gttacaacaa actgttcaac
0421 ggtgcgccgc cggaaggtga cattgctgtc gagtactgga gtacggtggc gaaaattccg gctcgccgtg
0491 gcgaagcgat taatcagtta aaacgcatca atgcggatgc accgggcaat acgggcctgc aaaacaatct
0561 ggcgctattg ctgtttagta gcgatcgccg tgacgaaggt tttgccgtcc tggaacagat ggcaaaatcg
0631 aacgccgggc gcgaaggggc ctctaaaatc tggtacgggc agattaaaga catgcccgtc agtgatgcca
0701 gtgtgtcggc gctgaaaaaa tatctctcga tctttagtga tggcgatagc gtggcggctg cgcaatcgca
0771 actggcagaa cagcaaaaac agctggccga tcctgctttc cgcgctcgtg cgcaaggttt agcggcggtg
0841 gactctggta tggcgggtaa agccattccc gaactacaac aggcggtgcg ggcgaacccg aaagacagtg
0911 aagctctggg ggcgctgggc caggcgtatt ctcagaaagg cgatcgcgcc aatgcagtgg cgaatctgga
0981 aaaagccctc gcactggacc cgcacagcag caacaacgac aaatggaaca gtctgctgaa agtaaaccgc
1051 tactggctgg cgatccagca gggcgatgct gcgctgaaag ccaataatcc tgaccgggca gaacgcctgt
1121 tccagcaggc gcgtaatgtc gataacaccg acagttatgc agtgctgggg ctgggcgatg tggcgatggc
1191 gcgaaaagat tatcccgccg ccgaacgtta ttatcagcag accttgcgta tggacagcgg caacactaac
1261 gccgtgcgcg ggctggcaaa tatttaccgc cagcaatcgc cagaaaaagc tgaagcgttt atcgcctcgc
1331 tctctgccag tcagcggcgt agcattgatg atatcgaacg cagcctgcaa aacgaccgtc tggcacagca
1401 ggcagaggca ctggaaaacc agggcaaatg ggcgcaggcg gcagcacttc agcggcaacg actggcgctg
1471 gaccccggca gcgtatggat tacttaccga ctttcgcagg atctctggca ggccggacaa cgcagccagg
1541 ccgatacgtt aatgcgcaat ctggcgcagc agaagtcgaa cgacccggag caggtttacg cttacgggct
1611 gtacctctct ggtcatgacc aggacagagc ggcgctggcg catatcaata gcctgccgcg tgcgcagtgg
1681 aacagcaata ttcaggagct ggttaatcga ctgcaaagcg atcaggtgct ggaaaccgct aaccgcctgc
1751 gagaaagcgg caaagaggca gaagcggaag cgatgctgcg ccagcaacca ccttccacgc gtattgacct
1821 cacgctggct gactgggcgc aacaacgacg tgattacacc gccgcccgcg ctgcatatca gaatgtcctg
1891 acgcgggagc cagctaacgc cgacgccatt cttggtctga cggaagtgga tattgctgcc ggtgacaaag
1961 cggcggcacg tagccagctg gcgaaactgc ccgctaccga taacgcctcg ctgaacacac agcggcgcgt
2031 ggcgctggca caggcgcagc ttggcgatac cgcagcagcg cagcggacgt ttaataagtt gatcccgcag
2101 gcaaaatctc agccaccgtc gatggaaagc gcgatggtgc tgcgtgatgg tgcgaagttt gaagcgcagg
2171 cgggcgatcc aacgcaggcg ctggaaacct acaaagacgc catggtcgca tccggtgtga ctacgacgcg
2241 tccgcaggat aacgacacct ttacccgact gacccgtaac gacgagaaag atgactggct gaaacgtggc
2311 gtgcgcagcg atgcggcgga cctctatcgc cagcaggatc ttaacgtcac ccttgagcac gattactggg
2381 gttcgagcgg caccggtggt tactccgatc tgaaagcgca cactaccatg ttgcaggtgg atgcgccgta
2451 ttctgacggg cggatgttct ttcgcagtga tttcgtcaat atgaacgtcg gcagtttctc cactaatgcc
2521 gatggcaaat gggatgacaa ctggggcacc tgtacattac aggactgtag cggcaaccgc agccagtcgg
2591 attccggtgc cagcgtggcg gtcggctggc gaaatgacgt ctggagctgg gatatcggta ccacgccgat
2661 gggcttcaac gtggtggatg tggtcggcgg catcagttac agcgatgata tcgggccgct gggttacacc
2731 gttaacgccc accgtcggcc catctccagt tctttgctgg cctttggtgg gcaaaaagac tccccgagca
2801 ataccgggaa aaaatggggt ggcgtacgtg ccgacggtgt ggggctaagt ctgagctacg ataaaggtga
2871 agcaaacggc gtctgggcat cgcttagtgg cgaccagtta accggtaaaa atgtcgaaga taactggcgc
2941 gtgcgctgga tgacgggcta ttactataag gtcattaacc agaacaatcg ccgcgtcaca atcggcctga
3011 acaacatgat ctggcattac gacaaagatc tgagtggcta ctcactcggt cagggcggtt actacagtcc
3081 gcaggaatac ctgtcgtttg ccataccggt gatgtggcgg gagcgcacgg aaaactggtc gtgggagctg
3151 ggtgcgtctg gctcgtggtc gcattcacgc accaaaacca tgccgcgtta tccgctgatg aatctgatcc
3221 cgaccgactg gcaggaagaa gctgcgcggc aatccaacga tggcggcagc agtcagggct tcggctacac
3291 ggcgcgggca ttacttgaac gacgtgttac ttccaactgg tttgttggca cggcaattga tatccagcag
3361 gcgaaagatt acgcacccag ccatttcctg ctctacgtac gttattccgc cgccggatgg cagggtgaca
3431 tggatttacc gccgcagccg ctgatacctt acgccgactg gtaagttttc agatagcgcc tctcttaatg
3501 ccgctgcgat cgggtatact cgggcggcaa tctgggattt ccggggggag acaatttgcg cgtaagtcgc
3571 tcgt
|
