|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
DE(envZ-malT)176
,
OCL18,19-1
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
feoC
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
feoC
Search strains by all related name:
feoC b3410 ECK3397 JW3373 o78 yhgG
|
General information (Go to Linear View: )
|
|
Gene Name
|
feoC
|
|
Alternative name
|
b3410,ECK3397,JW3373,o78,yhgG
|
|
Location, Length
|
3,540,750 - 3,540,986
(
+
)
;
76.31
min
;
237
(bp) ,
78
(aa)
|
|
Product
|
putative DNA-binding transcriptional regulator
|
|
Operon Name
|
feoABC
|
|
Note
|
GO_process: GO:0006355 - regulation of transcription, DNA-dependent
|
|
Function
|
|
|
Gene Ontology
|
GO:0005506
;
iron ion binding ( feoC )
GO:0046872
;
metal ion binding ( feoC )
GO:0051536
;
iron-sulfur cluster binding ( feoC )
|
|
PID
|
1789814
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
YHGG_ECOLI
(
P46845
)
|
|
- Protein name
|
Hypothetical protein yhgG.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yhgG; OrderedLocusNames=b3410, z4765, ECs4252;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yhgG
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Solution Structure Of E.Coli Protein Yhgg: The Northeast Structural Genomics Consortium Target Et95
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Protein yhgG
|
|
PSI-BLAST
|
Protein yhgG
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein Z4765 [Escherichia coli O157:H7 EDL933]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MASLIQVRDL LALRGRMEAA QISQTLNTPQ PMINAMLQQL ESMGKAVRIQ EEPDGCLSGS CKSCPEGKAC
0071 LREWWALR
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TGCTGCGCCG CGCGCGTAGC CGGGTGGATA
-070 TCGAACTGCT GGCAACCCGC AAGTCGGTAA GCAGTTGCTG CGCAGCCAGC ACCACCGGTG ATTGCCATTA
0001 atggcttcac ttattcaggt gcgcgatttg ctggcgttac ggggccgtat ggaagcggcc cagataagcc
0071 agacattgaa cactccacag ccaatgatta acgccatgct gcaacaactg gaaagtatgg gcaaagccgt
0141 gcggattcag gaagaacctg acggctgcct ctctggcagt tgtaaaagct gcccggaagg aaaagcctgt
0211 ctgcgcgagt ggtgggcgct gcgttaaCCT TACTCCATCG CCTGTTTTGG AAAGCCCGGT ATGCGTCTGC
0281 ATCCGGGCTT TTTTGCGTGC GGCTTTCCAT AAAAATGCAA CTCTTGCAGC ACGGCGT
|
