|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
|
|
|
Deletion
|
OCL19,20-1
(D)
,
OCL19,20-2
(D)
,
OCL19,20-3
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
rpe
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
rpe
Search strains by all related name:
rpe b3386 dod ECK3373 f225 JW3349 yhfD
|
General information (Go to Linear View: )
|
|
Gene Name
|
rpe
|
|
Alternative name
|
b3386,dod,ECK3373,f225,JW3349,yhfD
|
|
Location, Length
|
3,512,404 - 3,513,081
(
-
)
;
75.70
min
;
678
(bp) ,
225
(aa)
|
|
Product
|
D-ribulose-5-phosphate 3-epimerase
|
|
Operon Name
|
aroKB-damX-dam-rpe-gph-trpS
|
|
Note
|
GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0009052 - pentose-phosphate shunt, non-oxidative branch
|
|
Function
|
enzyme; Central intermediary metabolism: Non-oxidative branch, pentose pathway
|
|
Gene Ontology
|
GO:0003824
;
catalytic activity ( rpe )
GO:0004750
;
ribulose-phosphate 3-epimerase activity ( rpe )
GO:0005515
;
protein binding ( rpe )
GO:0005975
;
carbohydrate metabolic process ( rpe )
GO:0008152
;
metabolic process ( rpe )
GO:0016853
;
isomerase activity ( rpe )
|
|
PID
|
1789788
|
EC number
(KEGG Pathway)
|
5.1.3.1
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
RPE_ECOLI
(
P32661
)
|
|
- Protein name
|
Ribulose-phosphate 3-epimerase
|
|
- Synonyms
|
EC 5.1.3.1, Pentose-5-phosphate 3- epimerase, PPE, R5P3E
|
|
- Gene name
|
OrderedLocusNames=b3386, c4156, z4739, ECs4228, SF3404, S4358;
|
|
MMBR References
|
Mol Gen Genet. 1995;247(5):546-54.
Characterization of three genes in the dam-containing operon of Escherichia coli.
Lyngstadaas A, Lobner-Olesen A, Boye E.
(
7603433
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MKQYLIAPSI LSADFARLGE DTAKALAAGA DVVHFDVMDN HYVPNLTIGP MVLKSLRNYG ITAPIDVHLM
0071 VKPVDRIVPD FAAAGASIIT FHPEASEHVD RTLQLIKENG CKAGLVFNPA TPLSYLDYVM DKLDVILLMS
0141 VNPGFGGQSF IPQTLDKLRE VRRRIDESGF DIRLEVDGGV KVNNIGEIAA AGADMFVAGS AIFDQPDYKK
0211 VIDEMRSELA KVSHE
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 gcagcaacgg cggcacacgt aaaaaggtgg
-070 acgaactgct ggctttgtac aaaccaggag tcgtttcacc cgcgaaaaaa taattctcaa ggagaagcgg
0001 atgaaacagt atttgattgc cccctcaatt ctgtcggctg attttgcccg cctgggtgaa gataccgcaa
0071 aagccctggc agctggcgct gatgtcgtgc attttgacgt catggataac cactatgttc ccaatctgac
0141 gattgggcca atggtgctga aatccttgcg taactatggc attaccgccc ctatcgacgt acacctgatg
0211 gtgaaacccg tcgatcgcat tgtgcctgat ttcgctgccg ctggtgccag catcattacc tttcatccag
0281 aagcctccga gcatgttgac cgcacgctgc aactgattaa agaaaatggc tgtaaagcgg gtctggtatt
0351 taacccggcg acacctctga gctatctgga ttacgtgatg gataagctgg atgtgatcct gctgatgtcc
0421 gtcaaccctg gtttcggcgg tcagtctttc attcctcaaa cactggataa actgcgcgaa gtacgtcgcc
0491 gtatcgacga gtctggcttt gacattcgac tagaagtgga cggtggcgtg aaggtgaaca acattggcga
0561 aatcgctgcg gcgggcgcgg atatgttcgt cgccggttcg gcaatcttcg accagccaga ctacaaaaaa
0631 gtcattgatg aaatgcgcag tgaactggca aaggtaagtc atgaataagt ttgaagatat tcgcggcgtc
0701 gcttttgatc ttgatggtac gctggtcgac agtgctcctg gtcttgctgc tgcggtagat atggcgctgt
0771 atgcgctg
|
