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PEC Original Annotations
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|
Essentiality
|
|
Class
|
non-essential
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References (PMID)
|
|
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Deletion
|
9-1
(LD)
,
DE(gpt-lac)5
,
DE(argF-lac)169
,
OCR36,37-6 (LD 9C::Ap)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
prpB
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
prpB
Search strains by all related name:
prpB b0331 ECK0329 f148 f148a JW0323 o296 yahQ
|
General information (Go to Linear View: )
|
|
Gene Name
|
prpB
|
|
Alternative name
|
b0331,ECK0329,f148,f148a,JW0323,o296,yahQ
|
|
Location, Length
|
347,906 - 348,796
(
+
)
;
7.50
min
;
891
(bp) ,
296
(aa)
|
|
Product
|
2-methylisocitrate lyase
|
|
Operon Name
|
prpBCDE
|
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Note
|
putative phosphonomutase 2; GO_component: GO:0005737 - cytoplasm; GO_process: GO:0019395 - fatty acid oxidation
|
|
Function
|
putative enzyme; Not classified
|
|
Gene Ontology
|
GO:0003824
;
catalytic activity ( prpB )
GO:0008152
;
metabolic process ( prpB )
GO:0016829
;
lyase activity ( prpB )
GO:0046421
;
methylisocitrate lyase activity ( prpB )
|
|
PID
|
1786525
|
EC number
(KEGG Pathway)
|
4.1.3.30
|
|
SWISS-PROT
(
Show details
[
3
more]
)
|
Entry name(Acc.no)
|
PRP2_ECOLI
(
P55799
)
|
|
- Protein name
|
Serine/threonine protein phosphatase 2
|
|
- Synonyms
|
EC 3.1.3.16
|
|
- Gene name
|
Name=pphB; Synonyms=prpB; OrderedLocusNames=b2734;
|
| Sequences |
Amino acid
FASTA format
|
0001 MSLHSPGKAF RAALTKENPL QIVGTINANH ALLAQRAGYQ AIYLSGGGVA AGSLGLPDLG ISTLDDVLTD
0071 IRRITDVCSL PLLVDADIGF GSSAFNVART VKSMIKAGAA GLHIEDQVGA KRCGHRPNKA IVSKEEMVDR
0141 IRAAVDAKTD PDFVIMARTD ALAVEGLDAA IERAQAYVEA GAEMLFPEAI TELAMYRQFA DAVQVPILAN
0211 ITEFGATPLF TTDELRSAHV AMALYPLSAF RAMNRAAEHV YNVLRQEGTQ KSVIDTMQTR NELYESINYY
0281 QYEEKLDNLF ARSQVK
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 AAATTGAAAT TAAACATTTA ATTTTATTAA
-070 GGCAATTGTG GCACACCCCT TGCTTTGTCT TTATCAACGC AAATAACAAG TTGATAACAA AGGATGGGCT
0001 atgtctctac actctccagg taaagcgttt cgcgctgcac tgactaaaga aaatccattg cagattgttg
0071 gcaccatcaa cgctaatcat gcgctgttgg cgcagcgtgc cggatatcag gcaatttatc tttctggcgg
0141 tggcgtggcg gcaggttcgc tggggctgcc cgatctcggt atttctaccc ttgatgatgt gctgaccgac
0211 attcgccgta tcaccgacgt ttgttcgctg ccgctgctgg tggatgcgga tatcggtttt ggttcttcgg
0281 cctttaacgt ggcgcgcacc gtgaaatcga tgattaaagc cggtgcggca ggattgcata ttgaagatca
0351 ggttggtgcg aaacgctgcg gtcatcgtcc gaataaagcg atcgtctcga aagaagagat ggtggatcgg
0421 atccgcgcgg cggtggatgc gaaaaccgat cctgattttg tgatcatggc gcgcaccgat gctctggcgg
0491 tagaggggct ggatgcggcg atcgagcgtg cgcaggccta tgttgaagcg ggtgccgaga tgttgttccc
0561 ggaggcgatt accgaactcg ccatgtaccg ccagtttgcc gatgcggtgc aggtgccgat cctcgccaac
0631 atcaccgaat ttggtgccac gccgctgttt accaccgacg aattacgcag cgcccatgtc gcaatggcgc
0701 tgtacccact ttcagcgttc cgcgccatga accgcgccgc tgaacatgtc tacaacgtcc tgcgccagga
0771 aggcacgcag aaaagcgtca tcgacaccat gcagacccgc aacgagctgt acgaaagcat caactactac
0841 cagtacgaag agaagctcga caacctgttt gcccgtagcc aggtgaaata aAAAACGCCC GTTGATTGTA
0911 TTCGACAGCC GATGCCTGAT GCGTCGCTGA CGCGACTTAT CAGGCCTACG AGGTGCACTG AACTGTAGGT
0981 CGGATAAGAC G
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