|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCL22
(D)
,
OCL22-2
(D)
,
OCL22-6
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
bfd
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
bfd
Search strains by all related name:
bfd b3337 ECK3324 f64 JW3299 yheA
|
General information (Go to Linear View: )
|
|
Gene Name
|
bfd
|
|
Alternative name
|
b3337,ECK3324,f64,JW3299,yheA
|
|
Location, Length
|
3,464,819 - 3,465,013
(
-
)
;
74.68
min
;
195
(bp) ,
64
(aa)
|
|
Product
|
bacterioferritin-associated ferredoxin
|
|
Operon Name
|
bfd-bfr
|
|
Note
|
GO_component: GO:0005737 - cytoplasm; GO_process: GO:0006826 - iron ion transport
|
|
Function
|
|
|
Gene Ontology
|
GO:0005506
;
iron ion binding ( bfd )
GO:0006118
;
electron transport ( bfd )
GO:0006810
;
transport ( bfd )
GO:0046872
;
metal ion binding ( bfd )
GO:0051536
;
iron-sulfur cluster binding ( bfd )
GO:0051537
;
2 iron, 2 sulfur cluster binding ( bfd )
|
|
PID
|
1789735
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
BFD_ECOLI
(
P13655
;
O68930
)
|
|
- Protein name
|
Bacterioferritin-associated ferredoxin.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=bfd; OrderedLocusNames=b3337, c4108;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
bfd
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Bacterioferritin-associated ferredoxin
|
|
PSI-BLAST
|
Bacterioferritin-associated ferredoxin
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
bacterioferritin-associated ferredoxin [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
MYRISTYL
|
|
MMBR References
|
Biochemistry. 1996;35(20):6297-301.
A [2Fe-2S] protein encoded by an open reading frame upstream of the Escherichia coli bacterioferritin gene.
Garg RP, Vargo CJ, Cui X, Kurtz DM Jr.
(
8639572
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MYVCLCNGIS DKKIRQAVRQ FSPHSFQQLK KFIPVGNQCG KCVRAAREVM EDELMQLPEF KESA
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ttttattcat atttctattc tttgcttaaa
-070 aaagagtctt tccgtaattg aaataagaac tattttcatt tatttttgaa gaaagtatac gggagtctct
0001 atgtacgttt gtctttgtaa tggtatcagc gataaaaaaa ttcgtcaggc tgtgcgccag ttttcccctc
0071 actcgttcca gcaattaaaa aaatttattc cggtcggcaa tcagtgcggt aaatgtgtcc gggccgcgcg
0141 tgaagtgatg gaggatgaat taatgcagct gccggagttt aaggagtccg cataaacgga gtgtgttttt
0211 tgacttactc gtaagccgtt ctactcttca aagagtggaa gcgaaggagt caaaaaatga aaggtgatac
0281 taaagttata aatta
|
