|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
9-1
(LD)
,
DE(gpt-lac)5
,
DE(argF-lac)169
,
OCR36,37-6 (LD 9C::Ap)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yahN
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yahN
Search strains by all related name:
yahN b0328 ECK0326 f223 JW0320
|
General information (Go to Linear View: )
|
|
Gene Name
|
yahN
|
|
Alternative name
|
b0328,ECK0326,f223,JW0320
|
|
Location, Length
|
344,890 - 345,561
(
-
)
;
7.43
min
;
672
(bp) ,
223
(aa)
|
|
Product
|
amino acid exporter for proline, lysine, glutamate, homoserine
|
|
Operon Name
|
yahN
|
|
Note
|
putative cytochrome subunit of dehydrogenase
|
|
Function
|
putative enzyme; Not classified
|
|
Gene Ontology
|
GO:0005886
;
plasma membrane ( yahN )
GO:0006865
;
amino acid transport ( yahN )
GO:0016020
;
membrane ( yahN )
GO:0016021
;
integral to membrane ( yahN )
|
|
PID
|
1786522
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YAHN_ECOLI
(
P75693
;
P71307
)
|
|
- Protein name
|
Hypothetical protein yahN.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yahN; OrderedLocusNames=b0328;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yahN
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein yahN
|
|
PSI-BLAST
|
Hypothetical protein yahN
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
neutral amino-acid efflux system [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
GLYCOSAMINOGLYCAN
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
AMIDATION
|
| Sequences |
Amino acid
FASTA format
|
0001 MMQLVHLFMD EITMDPLHAV YLTVGLFVIT FFNPGANLFV VVQTSLASGR RAGVLTGLGV ALGDAFYSGL
0071 GLFGLATLIT QCEEIFSLIR IVGGAYLLWF AWCSMRRQST PQMSTLQQPI SAPWYVFFRR GLITDLSNPQ
0141 TVLFFISIFS VTLNAETPTW ARLMAWAGIV LASIIWRVFL SQAFSLPAVR RAYGRMQRVA SRVIGAIIGV
0211 FALRLIYEGV TQR
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tgggttgatt aataattagt tcagtcaggg
-070 cataaacgcc agtaaccgga aataagacac tttgtgatct ctctcgcacc cgattatttt tggtagaaat
0001 atgatgcagt tagttcactt atttatggat gaaatcacta tggatccttt gcatgccgtt tacctgaccg
0071 taggactgtt cgtgattact ttttttaatc cgggagccaa tctctttgtg gtagtacaaa ccagcctggc
0141 ttccggtcga cgcgcagggg tgctgaccgg gctgggcgtg gcgctgggcg atgcatttta ttccgggttg
0211 ggtttgtttg gtcttgcaac gctaattacg cagtgtgagg agattttttc gcttatcaga atcgtcggcg
0281 gcgcttatct cttatggttt gcgtggtgca gcatgcgccg ccagtcaaca ccgcaaatga gcacactaca
0351 acaaccgatt agcgccccct ggtatgtctt ttttcgccgc ggattaatta ccgatctctc taacccgcaa
0421 accgttttat tttttatcag tattttctca gtaacattaa atgccgaaac accaacatgg gcacgtttaa
0491 tggcctgggc ggggattgtg ctcgcatcaa ttatctggcg agtttttctt agtcaggcgt tttctttgcc
0561 cgctgtgcgt cgtgcttatg ggcgtatgca acgcgttgcc agtcgggtta ttggtgcaat tattggtgta
0631 ttcgcgctac gcctgattta cgaaggggtg acgcagcggt gagcagataa tttactctct acgtaatcaa
0701 cctgatttgc cgaatcacgg ccatcggcga tgatagcccc cgtaatgcgt ggtccttatt tccgataagt
0771 tt
|
