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PEC Original Annotations
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Essentiality
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Class
|
non-essential
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References (PMID)
|
|
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Deletion
|
OCL25
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
acuI
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
acuI
Search strains by all related name:
acuI b3253 ECK3241 JW3222 o324 yhdH
|
General information (Go to Linear View: )
|
|
Gene Name
|
acuI
|
|
Alternative name
|
b3253,ECK3241,JW3222,o324,yhdH
|
|
Location, Length
|
3,401,506 - 3,402,480
(
+
)
;
73.31
min
;
975
(bp) ,
324
(aa)
|
|
Product
|
putative acryloyl-CoA reductase
|
|
Operon Name
|
yhdH
|
|
Note
|
putative dehydrogenase
|
|
Function
|
putative enzyme; Not classified
|
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Gene Ontology
|
GO:0003824
;
catalytic activity ( yhdH )
GO:0005488
;
binding ( yhdH )
GO:0008152
;
metabolic process ( yhdH )
GO:0008270
;
zinc ion binding ( yhdH )
GO:0016491
;
oxidoreductase activity ( yhdH )
|
|
PID
|
1789651
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YHDH_ECOLI
(
P26646
)
|
|
- Protein name
|
Protein yhdH.
|
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- Synonyms
|
|
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- Gene name
|
Name=yhdH; OrderedLocusNames=b3253;
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Homology Analysis
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|
BLAST
|
|
Bacteria
|
|
GTOP
|
yhdH
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Crystal Structure Of E. Coli K-12 Yhdh
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Protein yhdH
|
|
PSI-BLAST
|
Alcohol dehydrogenase class 3
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
predicted oxidoreductase, Zn-dependent and NAD(P)-binding [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
LIPOCALIN
|
| Sequences |
Amino acid
FASTA format
|
0001 MQALLLEQQD GKTLASVQTL DESRLPEGDV TVDVHWSSLN YKDALAITGK GKIIRNFPMI PGIDFAGTVR
0071 TSEDPRFHAG QEVLLTGWGV GENHWGGLAE QARVKGDWLV AMPQGLDARK AMIIGTAGFT AMLCVMALED
0141 AGVRPQDGEI VVTGASGGVG STAVALLHKL GYQVVAVSGR ESTHEYLKSL GASRVLPRDE FAESRPLEKQ
0211 VWAGAIDTVG DKVLAKVLAQ MNYGGCVAAC GLAGGFTLPT TVMPFILRNV RLQGVDSVMT PPERRAQAWQ
0281 RLVADLPESF YTQAAKEISL SEAPNFAEAI INNQIQGRTL VKVN
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TATCTCGCAA TTTATTGCGC TTCATCGGCT
-070 TTGCTTTTCC ATTAGCGAGT ATAGTCTTCA GAAATTATTT TCCAATCCAT CATGCACATG AGGACCACTT
0001 atgcaggcgt tacttttaga acagcaggac ggcaaaactc tcgcatcagt acagactctg gacgaaagtc
0071 gcctgccgga gggcgatgtc acggtcgatg ttcactggtc gagcctgaac tataaagatg cgctggcgat
0141 taccggtaag ggaaaaatca tccgtaattt tccgatgatt cctgggatcg attttgccgg aactgtacgc
0211 accagcgaag atccgcgttt tcatgccggt caggaggtgt tactcactgg ctggggcgtt ggtgaaaacc
0281 actggggtgg gctggcggag caggcgcgag tgaaaggtga ctggctggtt gccatgccgc aagggctgga
0351 cgcgcgtaaa gcaatgatta tcggtactgc cggttttacc gccatgctgt gtgtgatggc gctggaagat
0421 gccggtgttc gcccgcagga cggggagatt gtcgtgacgg gtgccagtgg tggcgtcggc agtaccgccg
0491 tggcgctgct gcataagttg ggttatcagg tcgttgccgt ttccggtcgc gaaagtaccc atgaatatct
0561 gaaaagttta ggtgctagcc gtgttctccc tcgtgatgag tttgccgaat cccgtcctct ggaaaaacaa
0631 gtctgggctg gggcaattga caccgttggc gacaaagtgc tggcaaaagt gctggcgcaa atgaattacg
0701 gcggctgcgt ggcggcctgt ggtctggcgg gtggttttac tctgccaacc acggtcatgc catttattct
0771 gcgtaatgtc cgtttgcaag gggtggattc agtaatgacg ccaccagaac gccgcgcaca agcctggcag
0841 cgactggtcg ccgatttacc ggaatcattc tatacccagg cggcaaaaga gatatctctg tcagaggcac
0911 cgaactttgc cgaggccatc attaataacc agatccaggg tcgcacgctg gtgaaggtta actaaCCATT
0981 TAGCAGGGAA TAATAAGAGA GGGAACTCAT TTTGAAATCA TTATTCAATC GGTTAACGGG AAAAGCGGTT
1051 AGCCGGACAG CTTTCGTCGA ACACC
|
