MG1655
W3110
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Gene Report : rpmA
PEC Original Annotations
Essentiality
     Class essential
     References (PMID)
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
     Deletion OCL28,29-1 (D)  ,  OCL29,30-6 (AK4-11 / BK5-11) (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  rpmA
Related strains
     Strains Search Search strains by gene name:  rpmA   Search strains by all related name:  rpmA b3185 ECK3174 f85 JW3152 rpz

General information  (Go to Linear View:)
 Gene Name rpmA  
 Alternative name b3185,ECK3174,f85,JW3152,rpz  
 Location, Length 3,330,884 - 3,331,141 (  -  ) ;   71.79 min ; 258 (bp) ,   85 (aa) Go to Linear View
 Product 50S ribosomal subunit protein L27  
 Operon Name rplU-rpmA  
 Note GO_component: GO:0005737 - cytoplasm; GO_function: GO:0003735 - structural constituent of ribosome; GO_process: GO:0006412 - translation  
 Function structural component; Ribosomal proteins - synthesis, modification  
 Gene Ontology GO:0000049 ; tRNA binding ( rpmA )
GO:0003723 ; RNA binding ( rpmA )
GO:0003735 ; structural constituent of ribosome ( rpmA )
GO:0005622 ; intracellular ( rpmA )
GO:0005840 ; ribosome ( rpmA )
GO:0006412 ; translation ( rpmA )
GO:0019843 ; rRNA binding ( rpmA )
GO:0030529 ; ribonucleoprotein complex ( rpmA )
 PID 1789576  
 EC number
  (KEGG Pathway)   		 
Verified Protein Starts (data compiled from literature and appropriate citations are available from EcoGene)
     EcoGene rpmA ( EG50002 )  
    Number of removed 1 aa cleaved  
SWISS-PROT  ( Show details )
  botton Entry name(Acc.no) RL27_ECOLI ( P02427 )
    -  Protein name 50S ribosomal protein L27.  
    -  Synonyms  
    -  Gene name OrderedLocusNames=b3185, c3942, z4547, ECs4064, SF3225, S3443;  

 Linear View (Whole Mode)
View Location
   3320.0  –  3345.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP rpmA (  homologous genes of other bacterias  )  
    PDB     (database updated : 2007.02.20 )
         PSI-BLAST Chain W, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is  
    SWISS-PROT     (database updated : 2007.02.20 )
         BLAST 50S ribosomal protein L27  
         PSI-BLAST 50S ribosomal protein L27
    nr     (database updated : 2007.02.20 )
         BLAST 50S ribosomal protein L27 [Escherichia coli O157:H7 EDL933]  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE PKC_PHOSPHO_SITE    MYRISTYL    RIBOSOMAL_L27     

Other Cross-Reference
    EcoCyc rpmA 

MMBR References
J Bacteriol. 1979;138(3):832-8.
Genes coding for ribosomal proteins S15, L21, and L27 map near argG in Escherichia coli.
Kitakawa M, Dabbs ER, Isono K. ( 378941 )

Sequences
Amino acid
FASTA format 
0001 MAHKKAGGST RNGRDSEAKR LGVKRFGGES VLAGSIIVRQ RGTKFHAGAN VGCGRDHTLF AKADGKVKFE 
0071 VKGPKNRKFI SIEAE
Nucleotide
FASTA format

View sequence out neighbor 100bp 
-100                                             gtcgtcgtaa acactatcgt aagcagcagg 
-070 gccatcgtca gtggttcact gatgtgaaaa ttactggcat cagcgcctaa gacctgagga gagatttcaa 
0001 atggcacata aaaaggctgg cggctccaca cgtaacggtc gcgattcaga agctaaacgc ctgggcgtta 
0071 agcgtttcgg tggcgaatcc gttctggcgg gtagcatcat cgttcgtcaa cgtggtacca aattccacgc 
0141 tggcgctaac gtaggttgcg gtcgtgacca cactctgttt gctaaagcag acggtaaagt gaaattcgaa 
0211 gttaaaggcc cgaaaaaccg taaatttatc agcatcgaag ctgaataagt ttttcgcgtc ccggtaacgg 
0281 atgaaagccc cgcaacacgt tgcggggctt tttacattcg ataaccggta aaaatgcgca tggtgcgacg 
0351 ttaatccg