|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCL30
(D)
,
OCL30-2
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yhbV
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yhbV
Search strains by all related name:
yhbV b3159 ECK3147 JW5530 o298
|
General information (Go to Linear View: )
|
|
Gene Name
|
yhbV
|
|
Alternative name
|
b3159,ECK3147,JW5530,o298
|
|
Location, Length
|
3,300,511 - 3,301,389
(
+
)
;
71.14
min
;
879
(bp) ,
292
(aa)
|
|
Product
|
putative protease
|
|
Operon Name
|
yhbUV
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
GO:0006508
;
proteolysis ( yhbV )
GO:0008233
;
peptidase activity ( yhbV )
|
|
PID
|
87082220
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YHBV_ECOLI
(
P45475
)
|
|
- Protein name
|
Hypothetical protein yhbV.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yhbV; OrderedLocusNames=b3159;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yhbV
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein yhbV
|
|
PSI-BLAST
|
Hypothetical protein yhbV
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein SDY_3338 [Shigella dysenteriae Sd197]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MKYSLGPVLW YWPKETLEEF YQQAATSSAD VIYLGEAVCS KRRATKVGDW LEMAKSLAGS GKQIVLSTLA
0071 LVQASSELGE LKRYVENGEF LIEASDLGVV NMCAERKLPF VAGHALNCYN AVTLKILLKQ GMMRWCMPVE
0141 LSRDWLVNLL NQCDELGIRN QFEVEVLSYG HLPLAYSARC FTARSEDRPK DECETCCIKY PNGRNVLSQE
0211 NQQVFVLNGI QTMSGYVYNL GNELASMQGL VDVVRLSPQG TDTFAMLDAF RANENGAAPL PLTANSDCNG
0281 YWRRLAGLEL QA
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TTGTACCGCA AAGCGCGTGG ATGGAGACGC
-070 TCGGGTCGAT GTCCGAAGGC ACGCAAACCA CTCTTGGCGC ATATCACCGT AAATGGCAGT GAGAAAAGCA
0001 atgaaatatt ccttagggcc agtgctgtgg tactggccaa aagagacgct ggaagaattt tatcagcagg
0071 ccgccaccag cagcgccgac gtgatttatc ttggtgaagc ggtatgcagc aagcgtcggg caaccaaagt
0141 tggcgactgg ctggagatgg caaaatcgct cgccgggagt ggtaagcaga ttgtgctctc cacgctggcg
0211 ctggtgcagg catcatctga actgggcgaa ctgaaacgct atgttgagaa cggtgagttt ctgattgaag
0281 ccagcgatct cggcgtggtg aatatgtgcg ctgaacgcaa actgccgttc gtcgccgggc acgcgctgaa
0351 ctgctacaac gcggtgacac tgaaaatatt gctcaaacag ggcatgatgc gctggtgtat gccagtggag
0421 ctttcccgcg actggctggt gaatctgctt aatcagtgcg atgagctggg cattcgtaac cagtttgaag
0491 tggaagtcct gagctacggt catctgccgc tggcctactc cgcccgctgc tttaccgcgc gttcggaaga
0561 ccgcccgaaa gatgagtgtg aaacctgctg cattaagtat ccgaacgggc gcaacgtgct gtcgcaggaa
0631 aaccaacaag tgtttgtact caatggcatt cagaccatga gcggctacgt ttacaacctc ggtaacgagc
0701 tggcatccat gcagggcctg gttgatgtgg tccgcctgtc accgcagggt actgacactt tcgcgatgct
0771 cgacgccttc cgcgctaatg aaaatggcgc tgcaccactg ccgttgacgg cgaacagcga ctgtaacggc
0841 tactggcggc ggctggcagg actggagctg caagcctaaG TAAATAGCTC ACTTTGTTAA CAACTTTAAC
0911 TACTCTTTAA TGCAGTATTA AAGATTAATC GGTAACAAAG TGAGCTGTTA TGACTGATAA AACCATTGC
|
