|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCL30
(D)
,
OCL30-4
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yhbP
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yhbP
Search strains by all related name:
yhbP b3154 ECK3142 f147 JW3123
|
General information (Go to Linear View: )
|
|
Gene Name
|
yhbP
|
|
Alternative name
|
b3154,ECK3142,f147,JW3123
|
|
Location, Length
|
3,297,494 - 3,297,937
(
-
)
;
71.07
min
;
444
(bp) ,
147
(aa)
|
|
Product
|
conserved protein, UPF0306 family
|
|
Operon Name
|
yhbP
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
1789544
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YHBP_ECOLI
(
P45471
)
|
|
- Protein name
|
Hypothetical UPF0306 protein yhbP.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yhbP; OrderedLocusNames=b3154, SF3195, S3412;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yhbP
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
UPF0306 protein yhbP
|
|
PSI-BLAST
|
UPF0306 protein yhbP
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein b3154 [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
CK2_PHOSPHO_SITE
MYRISTYL
AMIDATION
|
| Sequences |
Amino acid
FASTA format
|
0001 METLIAISRW LAKQHVVTWC VQQEGELWCA NAFYLFDAQK VAFYILTEEK TRHAQMSGPQ AAVAGTVNGQ
0071 PKTVALIRGV QFKGEIRRLE GEESDLARKA YNRRFPVARM LSAPVWEIRL DEIKFTDNTL GFGKKMIWLR
0141 DSGTEQA
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 taaagcttat tgtcggcggt acggatcaag
-070 taaagaaacc agggtgtcat cgtctgcgtc gcatgttaag gtcaggccca cagtataaaa gagaacagca
0001 atggaaacac tcatcgccat cagccgttgg ctggcaaaac aacatgttgt cacttggtgt gtgcagcagg
0071 aaggggaact ctggtgcgct aatgcctttt atctttttga tgcgcagaaa gtcgccttct acattttgac
0141 ggaagaaaaa acgcgccacg cgcagatgag tgggccgcag gctgcggttg ccggaacggt aaacggtcag
0211 ccgaaaacgg tagcgttaat tcgcggtgtg cagtttaaag gtgagatccg caggctggaa ggtgaggaaa
0281 gcgacctcgc gcgcaaggcg tacaatcgtc gctttccggt tgccagaatg ctgtcggccc cggtgtggga
0351 aatccggctc gatgaaatca aattcaccga caacacgctg ggctttggta aaaaaatgat ttggctacgc
0421 gactcaggca ccgagcaggc gtaacgcctc gcggttaaac gctggcagat cgtccggtgt ccggctggta
0491 accagctgat ctttatcaac cacgacttcc tgatcgtaaa attccgcgcc cgca
|
