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PEC Original Annotations
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Essentiality
|
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Class
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non-essential
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References (PMID)
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|
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Deletion
|
OCL31
(D)
|
|
Related gene (W3110 PEC)
|
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Gene Search
|
Search MG1655 PEC by gene name:
agaC
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Related strains
|
|
Strains Search
|
Search strains by gene name:
agaC
Search strains by all related name:
agaC b3139 ECK3127 JW3108 o267 yraE
|
General information (Go to Linear View: )
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Gene Name
|
agaC
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|
Alternative name
|
b3139,ECK3127,JW3108,o267,yraE
|
|
Location, Length
|
3,282,707 - 3,283,510
(
+
)
;
70.75
min
;
804
(bp) ,
267
(aa)
|
|
Product
|
N-acetylgalactosamine-specific enzyme IIC component of PTS
|
|
Operon Name
|
agaS-kbaY-agaBCDI
|
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Note
|
PTS system N-acetylgalactosamine-specific IIC component 1
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Function
|
enzyme; Central intermediary metabolism: Amino sugars
|
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Gene Ontology
|
GO:0005351
;
sugar:hydrogen ion symporter activity ( agaC )
GO:0005886
;
plasma membrane ( agaC )
GO:0006810
;
transport ( agaC )
GO:0008643
;
carbohydrate transport ( agaC )
GO:0009401
;
phosphoenolpyruvate-dependent sugar phosphotransferase system ( agaC )
GO:0016020
;
membrane ( agaC )
GO:0016021
;
integral to membrane ( agaC )
|
|
PID
|
1789528
|
EC number
(KEGG Pathway)
|
2.7.1.69
|
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SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
PTPC_ECOLI
(
P42910
)
|
|
- Protein name
|
PTS system, N-acetylgalactosamine-specific IIC component 1
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- Synonyms
|
EIIC-Aga, N-acetylgalactosamine-permease IIC component 1
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- Gene name
|
Name=agaC; OrderedLocusNames=b3139;
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Homology Analysis
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BLAST
|
|
Bacteria
|
|
GTOP
|
agaC
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
N-acetylgalactosamine permease IIC component 1
|
|
PSI-BLAST
|
N-acetylgalactosamine permease IIC component 1
|
|
nr
(database updated :
2007.02.20
)
|
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BLAST
|
N-acetylgalactosamine-specific enzyme IIC component of PTS [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
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Pfam
|
|
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PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
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| Sequences |
Amino acid
FASTA format
|
0001 MHEITLLQGL SLAALVFVLG IDFWLEALFL FRPIIVCTLT GAILGDIQTG LITGGLTELA FAGLTPAGGV
0071 QPPNPIMAGL MTTVIAWSTG VDAKTAIGLG LPFSLLMQYV ILFFYSAFSL FMTKADKCAK EADTAAFSRL
0141 NWTTMLIVAS AYAVIAFLCT YLAQGAMQAL VKAMPAWLTH GFEVAGGILP AVGFGLLLRV MFKAQYIPYL
0211 IAGFLFVCYI QVSNLLPVAV LGAGFAVYEF FNAKSRQQAQ PQPVASKNEE EDYSNGI
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 GTGGCGTGAA TGTTTTCATT CAGGACGTCC
-070 CTGGCGATCA AAAAGAACAA ATCCCTGACT AAATCTAAAA TCGCCTTAAT ATTGGTTTGA GGTAATAAAA
0001 atgcatgaaa taaccctact tcagggatta tccctggcgg cgttagtttt tgttctgggg attgattttt
0071 ggctggaagc cttattttta ttccgcccga taatcgtttg taccctaact ggcgctattc tcggtgatat
0141 tcagactggc ttaattaccg gtggtctgac agagttggct ttcgccggat taacccctgc aggtggtgtt
0211 cagccgccca acccgattat ggcgggtctg atgaccaccg tcattgcatg gtctacgggc gttgatgcca
0281 aaacagcaat tggtcttggc ctgccgttta gtttgttaat gcagtacgtc attctgttct tctattccgc
0351 tttctcatta tttatgacca aagccgataa atgcgcgaaa gaggcggata cggcagcgtt ttcccggctt
0421 aactggacaa cgatgctcat cgtcgcttca gcgtatgcgg tgattgcttt cctctgtact tacctggcac
0491 agggggcgat gcaggcgctg gtgaaagcga tgcccgcctg gctgacccac ggctttgaag tggctggcgg
0561 tattctgcct gccgttggtt ttggcttgct gctgcgcgta atgttcaaag cgcaatatat cccttacctg
0631 atcgccggtt tcctgtttgt ttgctacatc caggtcagca acctgttgcc ggttgccgta ctgggcgcag
0701 gctttgcggt gtatgagttt ttcaatgcga aatcccggca gcaagcgcaa ccgcagcccg ttgccagtaa
0771 aaatgaagaa gaggactaca gcaatgggat ctgaAATCAG TAAAAAAGAT ATCACCCGTC TGGGCTTTCG
0841 TTCGTCGCTG CTGCAAGCGA GCTTTAACTA CGAAAGGATG CAGGCGGGCG GTTTTACCTG GGCG
|
