MG1655
W3110
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Gene Report : agaB
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)  
     Deletion OCL31 (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  agaB
Related strains
     Strains Search Search strains by gene name:  agaB   Search strains by all related name:  agaB b3138 ECK3126 JW3107 o158 yraD

General information  (Go to Linear View:)
 Gene Name agaB  
 Alternative name b3138,ECK3126,JW3107,o158,yraD  
 Location, Length 3,282,192 - 3,282,668 (  +  ) ;   70.74 min ; 477 (bp) ,   158 (aa) Go to Linear View
 Product N-acetylgalactosamine-specific enzyme IIB component of PTS  
 Operon Name agaS-kbaY-agaBCDI  
 Note PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 1 (EIIB-AGA); GO_component: GO:0005737 - cytoplasm  
 Function enzyme; Central intermediary metabolism: Amino sugars  
 Gene Ontology GO:0005351 ; sugar:hydrogen ion symporter activity ( agaB )
GO:0005737 ; cytoplasm ( agaB )
GO:0006810 ; transport ( agaB )
GO:0008643 ; carbohydrate transport ( agaB )
GO:0008982 ; protein-N(PI)-phosphohistidine-sugar phosphotransferase activity ( agaB )
GO:0009401 ; phosphoenolpyruvate-dependent sugar phosphotransferase system ( agaB )
GO:0016740 ; transferase activity ( agaB )
 PID 1789527  
 EC number
  (KEGG Pathway)   		2.7.1.69  
SWISS-PROT  ( Show details [ 2 more] )
  botton Entry name(Acc.no) PTPB_ECOLI ( P42909 )
    -  Protein name PTS system, N-acetylgalactosamine-specific IIB component 1  
    -  Synonyms EIIB-Aga, N-acetylgalactosamine-permease IIB component 1, Phosphotransferase enzyme II, B component 1, EC 2.7.1.69  
    -  Gene name Name=agaB; OrderedLocusNames=b3138;  

 Linear View (Whole Mode)
View Location
   3270.0  –  3295.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP agaB (  homologous genes of other bacterias  )  
    PDB     (database updated : 2007.02.20 )
         PSI-BLAST Chain A, Crystal Structure Of The Iibsor Domain Of The Sorbose Permease From Klebsiella Pneumoniae Solved To 1.75a Resolution  
    SWISS-PROT     (database updated : 2007.02.20 )
         BLAST N-acetylgalactosamine-specific phosphotransferase enzyme IIB component 1  
         PSI-BLAST Sorbose-specific phosphotransferase enzyme IIB component
    nr     (database updated : 2007.02.20 )
         BLAST N-acetylgalactosamine-specific enzyme IIB component of PTS [Escherichia coli K12]  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE PKC_PHOSPHO_SITE    CK2_PHOSPHO_SITE    MYRISTYL    AMIDATION     

Other Cross-Reference
    EcoCyc agaB 

Sequences
Amino acid
FASTA format 
0001 MTSPNILLTR IDNRLVHGQV GVTWTSTIGA NLLVVVDDVV ANDDIQQKLM GITAETYGFG IRFFTIEKTI 
0071 NVIGKAAPHQ KIFLICRTPQ TVRKLVEGGI DLKDVNVGNM HFSEGKKQIS SKVYVDDQDL TDLRFIKQRG 
0141 VNVFIQDVPG DQKEQIPD
Nucleotide
FASTA format

View sequence out neighbor 100bp 
-100                                             AAGGAGATAA CTAAACCTTA ATAAATACAT 
-070 CACTACAATA TCGCAACAAT AATATATTTA AAAAAATTAT ATTATTCAAC TTTATGGTGA GGATTACACA 
0001 atgaccagtc caaatattct cttaacccgt attgataacc gtctggttca cggtcaggtt ggcgtgacct 
0071 ggacatccac catcggtgca aatctgctgg tagtcgtgga tgatgttgtc gctaacgatg atattcaaca 
0141 gaaattaatg ggtattaccg cggaaaccta cggctttggc attcgtttct ttactatcga aaaaaccatt 
0211 aacgtcatcg gcaaagctgc accacatcag aagatcttcc tgatttgccg tacgccacaa acggtacgta 
0281 aattggtaga aggtggtatt gacctgaaag atgtcaacgt cggcaatatg catttctcgg aagggaaaaa 
0351 gcaaatcagc agtaaagttt atgtcgatga ccaggatctc acggacttac gttttattaa acaacgtggc 
0421 gtgaatgttt tcattcagga cgtccctggc gatcaaaaag aacaaatccc tgactaaATC TAAAATCGCC 
0491 TTAATATTGG TTTGAGGTAA TAAAAATGCA TGAAATAACC CTACTTCAGG GATTATCCCT GGCGGCGTTA 
0561 GTTTTTGTTC TGGGGAT