MG1655
W3110
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Gene Report : qseB
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)  
     Deletion DE(PC2)  ,  OCL36 (PC2) (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  qseB
Related strains
     Strains Search Search strains by gene name:  qseB   Search strains by all related name:  qseB b3025 ECK3016 JW2993 o219 preA xgiX ygiX

General information  (Go to Linear View:)
 Gene Name qseB  
 Alternative name b3025,ECK3016,JW2993,o219,preA,xgiX,ygiX  
 Location, Length 3,167,850 - 3,168,509 (  +  ) ;   68.28 min ; 660 (bp) ,   219 (aa) Go to Linear View
 Product quorum sensing DNA-binding response regulator in two-component regulatory system with QseC  
 Operon Name qseBC  
 Note putative 2-component transcriptional regulator; GO_process: GO:0006355 - regulation of transcription, DNA-dependent  
 Function  
 Gene Ontology GO:0000156 ; two-component response regulator activity ( qseB )
GO:0000160 ; two-component signal transduction system (phosphorelay) ( qseB )
GO:0003677 ; DNA binding ( qseB )
GO:0005737 ; cytoplasm ( qseB )
GO:0006350 ; transcription ( qseB )
GO:0006355 ; regulation of transcription, DNA-dependent ( qseB )
 PID 1789402  
 EC number
  (KEGG Pathway)   		 
SWISS-PROT  ( Show details [ 1 more] )
  botton Entry name(Acc.no) QSEB_ECOLI ( P52076 )
    -  Protein name Transcriptional regulatory protein qseB.  
    -  Synonyms  
    -  Gene name Name=qseB; OrderedLocusNames=b3025;  

 Linear View (Whole Mode)
View Location
   3155.0  –  3180.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP qseB (  homologous genes of other bacterias  )  
    PDB     (database updated : 2007.02.20 )
         PSI-BLAST Chain A, Crystal Structure At 1.50 A Of An OmprPHOB HOMOLOG FROM Thermotoga Maritima  
    SWISS-PROT     (database updated : 2007.02.20 )
         BLAST Transcriptional regulatory protein qseB  
         PSI-BLAST Transcriptional regulatory protein srrA (Staphylococcal respiratory response protein A)
    nr     (database updated : 2007.02.20 )
         BLAST DNA-binding response regulator in two-component regulatory system with QseC [Escherichia coli K12]  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE PKC_PHOSPHO_SITE    CK2_PHOSPHO_SITE    TYR_PHOSPHO_SITE    MYRISTYL    AMIDATION     

Other Cross-Reference
    COG COG0745TK 
    EcoCyc qseB 

Sequences
Amino acid
FASTA format 
0001 MRILLIEDDM LIGDGIKTGL SKMGFSVDWF TQGRQGKEAL YSAPYDAVIL DLTLPGMDGR DILREWREKG 
0071 QREPVLILTA RDALAERVEG LRLGADDYLC KPFALIEVAA RLEALMRRTN GQASNELRHG NVMLDPGKRI 
0141 ATLAGEPLTL KPKEFALLEL LMRNAGRVLS RKLIEEKLYT WDEEVTSNAV EVHVHHLRRK LGSDFIRTVH 
0211 GIGYTLGEK
Nucleotide
FASTA format

View sequence out neighbor 100bp 
-100                                             TAACAACTTC TTAAGGGAAA AAAATAAAAT 
-070 TTAGTGCTGT ACAGAGCGCG TTACAACACG GTTTACTGGC AGCAAATACG GTTATCGCAG GGATGAAAAA 
0001 atgcgaattt tactgataga agatgacatg ctgattggcg acggcatcaa aacgggcctt agtaaaatgg 
0071 gttttagcgt cgactggttt acacaaggtc gtcagggaaa agaggcgctt tatagcgcac cttatgatgc 
0141 ggtgatcctg gatttaacct taccaggcat ggatggtcgc gatattttgc gcgaatggcg agaaaaaggt 
0211 cagcgtgagc cggtactgat cctgaccgcg cgcgatgcgc tggcggaacg tgtagaaggg ctgcgtctgg 
0281 gagctgacga ttatctgtgt aaaccttttg cgttgataga agtcgccgcc aggctggaag ctctgatgcg 
0351 ccgaaccaac ggccaggcca gcaacgagct gcgccacggt aacgtcatgc tcgaccccgg caaacgtatc 
0421 gccacgctgg ctggcgaacc cttaacactg aaaccaaaag aatttgccct gctggaatta ctgatgcgta 
0491 acgctggtcg ggtactgtcg cgcaaactga ttgaagagaa actgtatacc tgggacgaag aggtcaccag 
0561 taatgccgtt gaagtgcatg tgcatcatct gcgacgcaaa ctcggtagtg attttattcg taccgtgcat 
0631 ggtattggtt acacattagg tgagaaatga AATTTACCCA ACGTCTTAGT CTGCGCGTCA GGCTGACGCT 
0701 AATCTTTTTA ATTCTGGCCT CGGTGACCTG GCTGCTTTCC AGCTTTGTCG CCTGGAAACA