MG1655
W3110
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Gene Report : araE
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)
J Bacteriol. 1981;148(2):472-9.
L-arabinose transport systems in Escherichia coli K-12.
Kolodrubetz D, Schleif R. ( 7028715 )
     Deletion OCL44 (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  araE
Related strains
     Strains Search Search strains by gene name:  araE   Search strains by all related name:  araE b2841 ECK2839 JW2809

General information  (Go to Linear View:)
 Gene Name araE  
 Alternative name b2841,ECK2839,JW2809  
 Location, Length 2,978,786 - 2,980,204 (  -  ) ;   64.20 min ; 1419 (bp) ,   472 (aa) Go to Linear View
 Product arabinose transporter  
 Operon Name araE  
 Note low-affinity L-arabinose transport system proton symport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane; GO_function: GO:0015524 -L-arabinose/beta-D-thiogalactopyranoside:hydrogen antiporter activity; GO_process: GO:0016052 - carbohydrate catabolic process  
 Function transport; Transport of small molecules: Carbohydrates, organic acids, alcohols  
 Gene Ontology GO:0005215; transporter activity ( araE )
GO:0005351; sugar:hydrogen ion symporter activity ( araE )
GO:0005886; plasma membrane ( araE )
GO:0006810; transport ( araE )
GO:0008643; carbohydrate transport ( araE )
GO:0015293; symporter activity ( araE )
GO:0016020; membrane ( araE )
GO:0016021; integral to membrane ( araE )
 PID 1789207  
 EC number
  (KEGG Pathway)
 
 
SWISS-PROT  ( Show details [ 1 more] )
  botton Entry name(Acc.no) ARAE_ECOLI ( P09830 ; Q46937 )
    -  Protein name Arabinose-proton symporter  
    -  Synonyms Arabinose transporter  
    -  Gene name Name=araE; OrderedLocusNames=b2841, z4161, ECs3698;  

 Linear View (Whole Mode)
View Location
   2970.0  –  2995.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP araE (  homologous genes of other bacterias  )  
    PDB     (database updated : 2007.02.20 )
         PSI-BLAST Chain A, Structure Of The Multidrug Transporter Emrd From Escherichia Coli  
    SWISS-PROT     (database updated : 2007.02.20 )
         BLAST Arabinose-proton symporter (Arabinose transporter)  
         PSI-BLAST Hexose transporter 2
    nr     (database updated : 2007.02.20 )
         BLAST low-affinity L-arabinose transport system proton symport protein [Escherichia coli O157:H7 EDL933]  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE ASN_GLYCOSYLATION    CAMP_PHOSPHO_SITE    PKC_PHOSPHO_SITE    CK2_PHOSPHO_SITE    MYRISTYL    AMIDATION    LEUCINE_ZIPPER    SUGAR_TRANSPORT_1    SUGAR_TRANSPORT_2     

Other Cross-Reference
    EcoCyc araE 

MMBR References
J Bacteriol. 1981;148(2):472-9.
L-arabinose transport systems in Escherichia coli K-12.
Kolodrubetz D, Schleif R. ( 7028715 )
J Mol Biol. 1981;151(2):215-27.
Regulation of the L-arabinose transport operons in Escherichia coli.
Kolodrubetz D, Schleif R. ( 6461771 )
Biochem J. 1981;196(1):269-83.
Identification of the AraE transport protein of Escherichia coli.
MacPherson AJ, Jones-Mortimer MC, Henderson PJ. ( 7030324 )
J Biol Chem. 1988;263:8003-8010
The cloning, DNA sequence, and overexpression of the gene araE coding for arabinose-proton symport in Escherichia coli K12.
Maiden, M. C. J., M. C. Jones-Mortimer, and P. J. F. Henderson.
J Mol Biol. 1983;171(4):369-81.
The araE low affinity L-arabinose transport promoter. Cloning, sequence, transcription start site and DNA binding sites of regulatory proteins.
Stoner C, Schleif R. ( 6319708 )

Sequences
Amino acid
FASTA format
0001 MVTINTESAL TPRSLRDTRR MNMFVSVAAA VAGLLFGLDI GVIAGALPFI TDHFVLTSRL QEWVVSSMML 
0071 GAAIGALFNG WLSFRLGRKY SLMAGAILFV LGSIGSAFAT SVEMLIAARV VLGIAVGIAS YTAPLYLSEM 
0141 ASENVRGKMI SMYQLMVTLG IVLAFLSDTA FSYSGNWRAM LGVLALPAVL LIILVVFLPN SPRWLAEKGR 
0211 HIEAEEVLRM LRDTSEKARE ELNEIRESLK LKQGGWALFK INRNVRRAVF LGMLLQAMQQ FTGMNIIMYY 
0281 APRIFKMAGF TTTEQQMIAT LVVGLTFMFA TFIAVFTVDK AGRKPALKIG FSVMALGTLV LGYCLMQFDN 
0351 GTASSGLSWL SVGMTMMCIA GYAMSAAPVV WILCSEIQPL KCRDFGITCS TTTNWVSNMI IGATFLTLLD 
0421 SIGAAGTFWL YTALNIAFVG ITFWLIPETK NVTLEHIERK LMAGEKLRNI GV

Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             gcagcaattt aatccatatt tatgctgttt 
-070 ccgacctgac acctgcgtga gttgttcacg tattttttca ctatgtctta ctctctgctg gcaggaaaaa 
0001 atggttacta tcaatacgga atctgcttta acgccacgtt ctttgcggga tacgcggcgt atgaatatgt 
0071 ttgtttcggt agctgctgcg gtcgcaggat tgttatttgg tcttgatatc ggcgtaatcg ccggagcgtt 
0141 gccgttcatt accgatcact ttgtgctgac cagtcgtttg caggaatggg tggttagtag catgatgctc 
0211 ggtgcagcaa ttggtgcgct gtttaatggt tggctgtcgt tccgcctggg gcgtaaatac agcctgatgg 
0281 cgggggccat cctgtttgta ctcggttcta tagggtccgc ttttgcgacc agcgtagaga tgttaatcgc 
0351 cgctcgtgtg gtgctgggca ttgctgtcgg gatcgcgtct tacaccgctc ctctgtatct ttctgaaatg 
0421 gcaagtgaaa acgttcgcgg taagatgatc agtatgtacc agttgatggt cacactcggc atcgtgctgg 
0491 cgtttttatc cgatacagcg ttcagttata gcggtaactg gcgcgcaatg ttgggggttc ttgctttacc 
0561 agcagttctg ctgattattc tggtagtctt cctgccaaat agcccgcgct ggctggcgga aaaggggcgt 
0631 catattgagg cggaagaagt attgcgtatg ctgcgcgata cgtcggaaaa agcgcgagaa gaactcaacg 
0701 aaattcgtga aagcctgaag ttaaaacagg gcggttgggc actgtttaag atcaaccgta acgtccgtcg 
0771 tgctgtgttt ctcggtatgt tgttgcaggc gatgcagcag tttaccggta tgaacatcat catgtactac 
0841 gcgccgcgta tcttcaaaat ggcgggcttt acgaccacag aacaacagat gattgcgact ctggtcgtag 
0911 ggctgacctt tatgttcgcc acctttattg cggtgtttac ggtagataaa gcagggcgta aaccggctct 
0981 gaaaattggt ttcagcgtga tggcgttagg cactctggtg ctgggctatt gcctgatgca gtttgataac 
1051 ggtacggctt ccagtggctt gtcctggctc tctgttggca tgacgatgat gtgtattgcc ggttatgcga 
1121 tgagcgccgc gccagtggtg tggatcctgt gctctgaaat tcagccgctg aaatgccgcg atttcggtat 
1191 tacctgttcg accaccacga actgggtgtc gaatatgatt atcggcgcga ccttcctgac actgcttgat 
1261 agcattggcg ctgccggtac gttctggctc tacactgcgc tgaacattgc gtttgtgggc attactttct 
1331 ggctcattcc ggaaaccaaa aatgtcacgc tggaacatat cgaacgcaaa ctgatggcag gcgagaagtt 
1401 gagaaatatc ggcgtctgat ttcacgggcc ggatgtgctg tacatccggc ccttttttcg ttaatagaga 
1471 ttgggcactt ggccgttgag gcgtttgtct cgttccttat tcagccttg