|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
LD3-18-1
(LD)
,
DE(relA-argA)216
,
OCL44,45-1
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
queF
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
queF
Search strains by all related name:
queF b2794 ECK2789 JW2765 o282 o282b yqcD
|
General information (Go to Linear View: )
|
|
Gene Name
|
queF
|
|
Alternative name
|
b2794,ECK2789,JW2765,o282,o282b,yqcD
|
|
Location, Length
|
2,923,370 - 2,924,218
(
+
)
;
63.01
min
;
849
(bp) ,
282
(aa)
|
|
Product
|
7-cyano-7-deazaguanine reductase (NADPH-dependent)
|
|
Operon Name
|
queF
|
|
Note
|
|
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Function
|
enzyme: queuosine biosynthesis
|
|
Gene Ontology
|
GO:0003934
;
GTP cyclohydrolase I activity ( queF )
GO:0005737
;
cytoplasm ( queF )
GO:0008616
;
queuosine biosynthetic process ( queF )
GO:0016491
;
oxidoreductase activity ( queF )
GO:0019438
;
aromatic compound biosynthetic process ( queF )
GO:0033739
;
queuine synthase activity ( queF )
GO:0046857
;
oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor ( queF )
|
|
PID
|
1789158
|
EC number
(KEGG Pathway)
|
1.7.1.-
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YQCD_ECOLI
(
Q46920
)
|
|
- Protein name
|
Hypothetical protein yqcD.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yqcD; OrderedLocusNames=b2794;
|
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yqcD
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Structural Genomics, Ioli Protein
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
NADPH-dependent 7-cyano-7-deazaguanine reductase
|
|
PSI-BLAST
|
NADPH-dependent 7-cyano-7-deazaguanine reductase
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein b2794 [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
ATP_GTP_A
|
| Sequences |
Amino acid
FASTA format
|
0001 MSSYANHQAL AGLTLGKSTD YRDTYDASLL QGVPRSLNRD PLGLKADNLP FHGTDIWTLY ELSWLNAKGL
0071 PQVAVGHVEL DYTSVNLIES KSFKLYLNSF NQTRFNNWDE VRQTLERDLS TCAQGKISVA LYRLDELEGQ
0141 PIGHFNGTCI DDQDITIDNY EFTTDYLENA TCGEKVVEET LVSHLLKSNC LITHQPDWGS LQIQYRGRQI
0211 DREKLLRYLV SFRHHNEFHE QCVERIFNDL LRFCQPEKLS VYARYTRRGG LDINPWRSNS DFVPSTTRLV
0281 RQ
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ATCTTTCAGG GCTTGTGCGG TCAAATCGTC
-070 CACTAATTTC TCTCTTCACT TAAACCAGAT ACACTTGTCG TTTAGTTTAT CTGGTTTATG ACGGTGAAAC
0001 atgtcttctt atgcaaacca tcaggcactt gcgggcctga ctcttggaaa atcaaccgat taccgggata
0071 cctatgacgc cagcctactg caaggcgttc cacgcagcct gaatcgcgac ccgctgggtc tgaaagcgga
0141 taacctgcct tttcacggta cggatatctg gacgctgtat gaactttcct ggctgaatgc gaaaggtttg
0211 ccgcaggtcg ctgtcggtca tgttgaactt gattacacca gcgtaaatct gattgagtcg aagagtttta
0281 agctctatct caacagtttt aaccagacgc gttttaataa ctgggatgag gtgcgccaga cgctggagcg
0351 cgacttaagc acttgcgctc agggtaagat tagcgtggcg ttatatcgtc ttgatgaact ggaaggccag
0421 ccgataggtc attttaatgg cacttgcatt gatgaccagg atatcactat cgataactat gaattcacta
0491 ctgactatct ggagaatgcc acctgtggtg aaaaagtagt ggaagagacg cttgtcagcc acctgctgaa
0561 atcaaactgc ctgatcaccc atcaaccaga ttggggttcg ctccaaattc agtatcgtgg acgccaaatt
0631 gacagagaaa aactgctgcg ttacctggtc tcattccgtc atcacaacga gttccacgaa cagtgcgtgg
0701 aacgcatctt taatgacctg ttacgcttct gccagccaga aaaattgagc gtttacgcac gttatacccg
0771 tcgtggcggt ctggacatta acccgtggcg cagtaatagc gattttgtcc catcgaccac aagactggtt
0841 cggcaataaA TTTTTTCTCA ATTTTGCGTG CTGGATTCAC GCAGAAGGTT GTGAAAGGTC ATCAGGCAGG
0911 GCTATTGTAA TCAAAGGGAA TGACGATATT CGTCCCATA
|
