|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
21
(LD)
,
DE(recA-srlR)300
,
OCL47,48-1 (LD 21_CRS)
(D)
,
OCL47,48-2 (LD 21_P/O)
(D)
,
OCL48
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
gutM
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
gutM
Search strains by all related name:
gutM b2706 ECK2701 JW2675 srlM
|
General information (Go to Linear View: )
|
|
Gene Name
|
gutM
|
|
Alternative name
|
b2706,ECK2701,JW2675,srlM
|
|
Location, Length
|
2,826,643 - 2,827,002
(
+
)
;
60.92
min
;
360
(bp) ,
119
(aa)
|
|
Product
|
DNA-binding transcriptional activator of glucitol operon
|
|
Operon Name
|
srlAEBD-gutM-srlR-gutQ
|
|
Note
|
glucitol operon activator; GO_process: GO:0016052 - carbohydrate catabolic process
|
|
Function
|
regulator; Degradation of small molecules: Carbon compounds
|
|
Gene Ontology
|
GO:0003677
;
DNA binding ( gutM )
GO:0006350
;
transcription ( gutM )
GO:0006355
;
regulation of transcription, DNA-dependent ( gutM )
GO:0009401
;
phosphoenolpyruvate-dependent sugar phosphotransferase system ( gutM )
|
|
PID
|
1789058
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
GUTM_ECOLI
(
P15081
)
|
|
- Protein name
|
Glucitol operon activator protein.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=gutM; Synonyms=srlM; OrderedLocusNames=b2706;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
gutM
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Glucitol operon activator protein
|
|
PSI-BLAST
|
Glucitol operon activator protein
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
DNA-binding transcriptional activator of glucitol operon [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
MYRISTYL
|
|
MMBR References
|
J Mol Biol. 1988;203(3):569-83.
Positive and negative regulators for glucitol (gut) operon expression in Escherichia coli.
Yamada M, Saier MH Jr.
(
3062173
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MVSALITVAV IAWCAQLALG GWQISRFNRA FDTLCQQGRV GVGRSSGRFK PRVVVAIALD DQQRIVDTLF
0071 MKGLTVFARP QKIPAITGMH AGDLQPDVIF PHDPLSQNAL SLALKLKRG
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 CAGCGGAGAT CCATTAAGGA TCTCCGTGAG
-070 ACTATAGAAT GCCTGATGCG CTACGCTCAT CAGGCATACA GGACTTCCGC CACTACATTA AGGAAAAGTT
0001 atggtatccg cactcatcac cgtcgccgtt atcgcctggt gtgcgcaact ggccttaggc ggctggcaaa
0071 tttctcgttt taaccgtgcc ttcgacacac tatgccagca agggcgggtt ggcgtgggcc gttccagcgg
0141 gcgctttaaa ccgcgggtcg tggtcgccat cgcgctggac gatcagcagc gcatcgtcga caccttgttt
0211 atgaaaggac tgaccgtctt cgcccgaccg caaaaaattc ccgcaattac cggtatgcat gcgggtgatt
0281 tacagcccga tgtgatcttt ccccatgatc cactatcaca gaatgctcta tcattggcgc ttaaactgaa
0351 acgtggataa TTTCGTTGTG AATGTTACTT GCTTGCGAAG TTATCATTTT GAAACCTAAA TCAGGTAATC
0421 ACGCCCATGA AACCTCGTCA GCGTCAGGCC GCCATTCTGG
|
