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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Deletion
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DE(lpcA-proB)70
,
DE(gpt-lac)5
,
OCR36,37-1
(D)
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Related gene (W3110 PEC)
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Gene Search
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Search MG1655 PEC by gene name:
phoE
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Related strains
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Strains Search
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Search strains by gene name:
phoE
Search strains by all related name:
phoE b0241 ECK0242 JW0231 ompE
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General information (Go to Linear View: )
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Gene Name
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phoE
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Alternative name
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b0241,ECK0242,JW0231,ompE
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Location, Length
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258,269 - 259,324
(
-
)
;
5.57
min
;
1056
(bp) ,
351
(aa)
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Product
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outer membrane phosphoporin protein E
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Operon Name
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phoE
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Note
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outer membrane pore protein E (E,Ic,NmpAB); GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0009279 - cell outer membrane
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Function
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membrane; Outer membrane constituents
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Gene Ontology
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GO:0005215
;
transporter activity ( phoE )
GO:0006810
;
transport ( phoE )
GO:0006811
;
ion transport ( phoE )
GO:0006950
;
response to stress ( phoE )
GO:0009279
;
cell outer membrane ( phoE )
GO:0016020
;
membrane ( phoE )
GO:0016021
;
integral to membrane ( phoE )
GO:0019867
;
outer membrane ( phoE )
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PID
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1786436
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EC number
(KEGG Pathway)
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SWISS-PROT
(
Show details
[
2
more]
)
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Entry name(Acc.no)
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PHOE_ECOLI
(
P02932
)
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- Protein name
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Outer membrane pore protein E precursor.
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- Synonyms
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- Gene name
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Name=phoE; Synonyms=ompE; OrderedLocusNames=b0241;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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phoE
(
homologous genes of other bacterias
)
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PDB
(database updated :
2007.02.20
)
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PSI-BLAST
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Chain , Phosphoporin
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SWISS-PROT
(database updated :
2007.02.20
)
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BLAST
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Outer membrane pore protein E precursor
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PSI-BLAST
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Outer membrane pore protein E precursor
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nr
(database updated :
2007.02.20
)
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BLAST
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outer pore protein E precursor [Escherichia coli]
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Pfam 28.0
(database updated :
2015-05
)
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Pfam
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PROSITE
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PROSITE
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ASN_GLYCOSYLATION
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
AMIDATION
GRAM_NEG_PORIN
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MMBR References
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J Gen Microbiol. 1983;129(10):3215-25.
Sub-cloning of the wild-type proAB region of the Escherichia coli genome.
Hayzer DJ.
(
6317797
)
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J Bacteriol. 1991;173(23):7407-8.
Locations of the genes from pepD through proA on the physical map of the Escherichia coli chromosome.
Henrich B, Plapp R.
(
1938933
)
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Gene. 1984;32(1-2):243-9.
Structural and functional organization of the gpt gene region of Escherichia coli.
Nuesch J, Schumperli D.
(
6397401
)
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J Mol Biol. 1983;163(4):513-32.
Complete nucleotide sequence of phoE, the structural gene for the phosphate limitation inducible outer membrane pore protein of Escherichia coli K12.
Overbeeke N, Bergmans H, van Mansfeld F, Lugtenberg B.
(
6341601
)
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J Bacteriol. 1981;147(1):118-23.
Localization of phoE, the structural gene for outer membrane protein e in Escherichia coli K-12.
Tommassen J, Lugtenberg B.
(
7016839
)
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J Mol Biol. 1987;198(4):633-41.
Molecular analysis of the promoter region of the Escherichia coli K-12 phoE gene. Identification of an element, upstream from the promoter, required for efficient expression of phoE protein.
Tommassen J, Koster M, Overduin P.
(
2828642
)
|
J Bacteriol. 1982;149(2):668-72.
Cloning of phoE, the structural gene for the Escherichia coli phosphate limitation-inducible outer membrane pore protein.
Tommassen J, Overduin P, Lugtenberg B, Bergmans H.
(
6276365
)
|
Mol Gen Genet. 1982;185:105-110.
Cloning of ompF, the structural gene for an outer membrane pore protein of Escherichia coli K12: physical localization and homology with the phoE gene.
Tommassen, J., P. van der Ley, A. van der Ende, H. Bergmans, and B. Lugtenberg.
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J Bacteriol. 1996;178:5320-5322
Demonstration of a folded monomeric form of porin PhoE of Escherichia coli in vivo.
Van Gelder, P., and J. Tommassen.
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| Sequences |
Amino acid
FASTA format
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0001 MKKSTLALVV MGIVASASVQ AAEIYNKDGN KLDVYGKVKA MHYMSDNASK DGDQSYIRFG FKGETQINDQ
0071 LTGYGRWEAE FAGNKAESDT AQQKTRLAFA GLKYKDLGSF DYGRNLGALY DVEAWTDMFP EFGGDSSAQT
0141 DNFMTKRASG LATYRNTDFF GVIDGLNLTL QYQGKNENRD VKKQNGDGFG TSLTYDFGGS DFAISGAYTN
0211 SDRTNEQNLQ SRGTGKRAEA WATGLKYDAN NIYLATFYSE TRKMTPITGG FANKTQNFEA VAQYQFDFGL
0281 RPSLGYVLSK GKDIEGIGDE DLVNYIDVGA TYYFNKNMSA FVDYKINQLD SDNKLNINND DIVAVGMTYQ
0351 F
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tctgtaatat atctttaaca atctcaggtt
-070 aaaaactttc ctgttttcaa cgggactctc ccgctgaata ttcgcgcgtt aattaaaatc aggaatgaaa
0001 atgaaaaaga gcactctggc attagtggtg atgggcattg tggcatctgc atctgtacag gctgcagaaa
0071 tatataataa agacggtaat aaactggatg tctatggcaa agttaaagcc atgcattata tgagtgataa
0141 cgccagtaaa gatggcgacc agagttatat ccgttttggt ttcaaaggcg aaacacaaat taacgatcaa
0211 ctgactggtt atggtcgttg ggaagcagag tttgccggta ataaagcaga gagtgatact gcacagcaaa
0281 aaacgcgtct cgcttttgcc gggttgaaat ataaagattt gggttctttc gattatggtc gtaacctggg
0351 ggcgttgtat gacgtggaag cctggaccga tatgttcccg gaatttggtg gcgattcctc ggcgcagacc
0421 gacaacttta tgaccaaacg cgccagcggt ctggcgacgt atcggaacac cgacttcttc ggcgttatcg
0491 atggcctgaa cttaaccctg caatatcaag ggaaaaacga aaaccgcgac gttaaaaagc aaaacggcga
0561 tggcttcggc acgtcattga catatgactt tggcggcagc gatttcgcca ttagtggggc ctataccaac
0631 tcagatcgca ccaacgagca gaacctgcaa agccgtggca caggcaagcg tgcagaagca tgggcaacag
0701 gtctgaaata cgatgccaat aatatttatc tggcaacttt ctattctgaa acacgcaaaa tgacgccaat
0771 aactggcggc tttgccaata agacacagaa ctttgaagcg gtcgctcaat accagtttga ctttggtctg
0841 cgtccatcgc tgggttatgt cttatcgaaa gggaaagata ttgaaggtat cggtgatgaa gatctggtca
0911 attatatcga cgtcggtgct acgtattatt tcaacaaaaa tatgtcagcg tttgttgatt ataaaatcaa
0981 ccaactggat agcgataaca aattgaatat taataatgat gatattgtcg cggttggcat gacgtatcag
1051 ttttaatgaa tattgccgga tgtgatgcat ccggcacatt tcactcacgc cgttaacttc accggctcgt
1121 cacgaaaatc atccgccggt tccagcttca gattca
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