|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Mol Gen Genet. 1992;235(1):22-32.
Characterization of a chromosomally encoded, non-PTS metabolic pathway for sucrose utilization in Escherichia coli EC3132.
Bockmann J, Heuel H, Lengeler JW.
(
1435727
)
|
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
|
|
|
Deletion
|
OCL63
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yfdN
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yfdN
Search strains by all related name:
yfdN b2357 cscR ECK2351 f164 JW5385 xylU yzyA
|
General information (Go to Linear View: )
|
|
Gene Name
|
yfdN
|
|
Alternative name
|
b2357,cscR,ECK2351,f164,JW5385,xylU,yzyA
|
|
Location, Length
|
2,470,409 - 2,470,903
(
-
)
;
53.25
min
;
495
(bp) ,
164
(aa)
|
|
Product
|
CPS-53 (KpLE1) prophage; putative protein
|
|
Operon Name
|
yfdONMLK
|
|
Note
|
|
|
Function
|
Phage or Prophage Related
|
|
Gene Ontology
|
|
|
PID
|
1788699
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yfdN
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Crystal Structure Of A Mutant Of Acid Phosphatase From Escherichia Blattae (G74dI153T)
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein yfdN
|
|
PSI-BLAST
|
Hypothetical protein yfdN
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
CPS-53 (KpLE1) prophage; predicted protein [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MSMSLLNDVQ KFIEAHPGCT SGDIADAFAG YSRQRVLQSA SKLRQSGRVA HRCEGDTHRH FPRLTERAQD
0071 PEPQPVRETR PVRNFYVGTN DPRVILCLTR QAEELESRGL YRRAATVWMA AFRESHSQPE RNNFLARRER
0141 CLRKSSKRAA SGEEWYLSGN YVGA
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 cgccgtccgt cagcacgtac acagaaaaac
-070 gcgaagaccc gtacttcaaa gccagttacg acaatgtgga ctacagccag atcccggcag gattcagggg
0001 gtgagcatga gtcttttgaa tgacgttcag aaattcattg aagcccatcc gggctgtact tccggagaca
0071 ttgcggatgc ttttgcaggt tactcacggc agcgcgttct gcagtcagca agcaagttac gtcagagtgg
0141 gcgtgtggct caccgttgtg aaggagatac acacagacat ttcccgcgcc tgactgagag agcgcaggat
0211 ccggaaccac aaccagttcg tgaaaccaga cctgtgcgca atttctatgt cggcactaac gacccgcggg
0281 tgattttgtg cctgacccgc caggcggaag aactggagtc caggggctta taccgtcgtg ctgcaacggt
0351 gtggatggcg gcattccgtg aaagccactc ccagccagaa cgaaacaatt ttctggcgcg tcgtgaacgg
0421 tgtttacgga aaagcagtaa gcgggctgca tcaggtgaag agtggtatct ctcagggaat tacgtggggg
0491 cttaatgagt aataaatatt gccaggcgct ggtggagctg cggaacaaac cagcccatga actgaaggaa
0561 gtgggcgatc agtggcgcac gccggacaac atttt
|
