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PEC Original Annotations
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|
Essentiality
|
|
Class
|
non-essential
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References (PMID)
|
|
|
Deletion
|
OCL63
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
fadI
|
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Related strains
|
|
Strains Search
|
Search strains by gene name:
fadI
Search strains by all related name:
fadI b2342 ECK2336 f436 JW2339 yfcY
|
General information (Go to Linear View: )
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Gene Name
|
fadI
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|
Alternative name
|
b2342,ECK2336,f436,JW2339,yfcY
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|
Location, Length
|
2,457,181 - 2,458,491
(
-
)
;
52.96
min
;
1311
(bp) ,
436
(aa)
|
|
Product
|
beta-ketoacyl-CoA thiolase, anaerobic, subunit
|
|
Operon Name
|
fadIJ
|
|
Note
|
putative acyltransferase
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Function
|
putative enzyme; Not classified
|
|
Gene Ontology
|
GO:0003824
;
catalytic activity ( fadI )
GO:0003988
;
acetyl-CoA C-acyltransferase activity ( fadI )
GO:0005737
;
cytoplasm ( fadI )
GO:0006629
;
lipid metabolic process ( fadI )
GO:0006631
;
fatty acid metabolic process ( fadI )
GO:0008152
;
metabolic process ( fadI )
GO:0008415
;
acyltransferase activity ( fadI )
GO:0016042
;
lipid catabolic process ( fadI )
GO:0016740
;
transferase activity ( fadI )
|
|
PID
|
1788683
|
EC number
(KEGG Pathway)
|
2.3.1.16
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YFCY_ECOLI
(
P76503
;
P77208; P77230
)
|
|
- Protein name
|
Probable 3-ketoacyl-CoA thiolase
|
|
- Synonyms
|
EC 2.3.1.16, Acetyl-CoA acyltransferase, Beta-ketothiolase
|
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- Gene name
|
Name=yfcY; OrderedLocusNames=b2342;
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yfcY
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Human Cytosolic Acetoacetyl-Coa Thiolase Complexed With Coa
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
3-ketoacyl-CoA thiolase
|
|
PSI-BLAST
|
3-ketoacyl-CoA thiolase
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
acetyl-CoA acetyltransferase [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
THIOLASE_1
THIOLASE_3
THIOLASE_2
|
| Sequences |
Amino acid
FASTA format
|
0001 MGQVLPLVTR QGDRIAIVSG LRTPFARQAT AFHGIPAVDL GKMVVGELLA RSEIPAEVIE QLVFGQVVQM
0071 PEAPNIAREI VLGTGMNVHT DAYSVSRACA TSFQAVANVA ESLMAGTIRA GIAGGADSSS VLPIGVSKKL
0141 ARVLVDVNKA RTMSQRLKLF SRLRLRDLMP VPPAVAEYST GLRMGDTAEQ MAKTYGITRE QQDALAHRSH
0211 QRAAQAWSDG KLKEEVMTAF IPPYKQPLVE DNNIRGNSSL ADYAKLRPAF DRKHGTVTAA NSTPLTDGAA
0281 AVILMTESRA KELGLVPLGY LRSYAFTAID VWQDMLLGPA WSTPLALERA GLTMSDLTLI DMHEAFAAQT
0351 LANIQLLGSE RFAREALGRA HATGEVDDSK FNVLGGSIAY GHPFAATGAR MITQTLHELR RRGGGFGLVT
0421 ACAAGGLGAA MVLEAE
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 gctcccactt tcccttttct ccacttggct
-070 aaatgtaaaa aaatggttaa gactatgatc aggtcagacc actttattta tttttttaca ggggagtgtt
0001 atgggtcagg ttttaccgct ggttacccgc cagggcgatc gtatcgccat tgttagcggt ttacgtacgc
0071 cttttgcccg tcaggcgacg gcttttcatg gcattcccgc ggttgattta gggaagatgg tggtaggcga
0141 actgctggca cgcagcgaga tccccgccga agtgattgaa caactggtct ttggtcaggt cgtacaaatg
0211 cctgaagccc ccaacattgc gcgtgaaatt gttctcggta cgggaatgaa tgtacatacc gatgcttaca
0281 gcgtcagccg cgcttgcgct accagtttcc aggcagttgc aaacgtcgca gaaagcctga tggcgggaac
0351 tattcgagcg gggattgccg gtggggcaga ttcctcttcg gtattgccaa ttggcgtcag taaaaaactg
0421 gcgcgcgtgc tggttgatgt caacaaagct cgtaccatga gccagcgact gaaactcttc tctcgcctgc
0491 gtttgcgcga cttaatgccc gtaccacctg cggtagcaga atattctacc ggcttgcgga tgggcgacac
0561 cgcagagcaa atggcgaaaa cctacggcat cacccgagaa cagcaagatg cattagcgca ccgttcgcat
0631 cagcgtgccg ctcaggcatg gtcagacgga aaactcaaag aagaggtgat gactgccttt atccctcctt
0701 ataaacaacc gcttgtcgaa gacaacaata ttcgcggtaa ttcctcgctt gccgattacg caaagctgcg
0771 cccggcgttt gatcgcaaac acggaacggt aacggcggca aacagtacgc cgctgaccga tggcgcggca
0841 gcggtgatcc tgatgactga atcccgggcg aaagaattag ggctggtgcc gctggggtat ctgcgcagct
0911 acgcatttac tgcgattgat gtctggcagg acatgttgct cggtccagcc tggtcaacac cgctggcgct
0981 ggagcgtgcc ggtttgacga tgagcgatct gacattgatc gatatgcacg aagcctttgc agctcagacg
1051 ctggcgaata ttcagttgct gggtagtgaa cgttttgctc gtgaagcact ggggcgtgca catgccactg
1121 gcgaagtgga cgatagcaaa tttaacgtgc ttggcggttc gattgcttac gggcatccct tcgcggcgac
1191 cggcgcgcgg atgattaccc agacattgca tgaacttcgc cgtcgcggcg gtggatttgg tttagttacc
1261 gcctgtgctg ccggtgggct tggcgcggca atggttctgg aggcggaata atggaaatga catcagcgtt
1331 tacccttaat gttcgtctgg acaacattgc cgttatcacc atcgacgtac cgggtgagaa aatgaatacc
1401 ctgaaggcgg a
|
