|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
J Bacteriol. 1992;174(17):5755-7.
The dedB (usg) open reading frame of Escherichia coli encodes a subunit of acetyl-coenzyme A carboxylase.
Li SJ, Rock CO, Cronan JE Jr.
(
1355086
)
|
|
|
Deletion
|
OCL64
(D)
,
OCL64-10
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
usg
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
usg
Search strains by all related name:
usg b2319 ECK2313 JW2316 usg1
|
General information (Go to Linear View: )
|
|
Gene Name
|
usg
|
|
Alternative name
|
b2319,ECK2313,JW2316,usg1
|
|
Location, Length
|
2,433,658 - 2,434,671
(
-
)
;
52.45
min
;
1014
(bp) ,
337
(aa)
|
|
Product
|
putative semialdehyde dehydrogenase
|
|
Operon Name
|
pdxB-usg-truA-dedA
|
|
Note
|
putative PTS system enzyme II A component
|
|
Function
|
putative transport; Not classified
|
|
Gene Ontology
|
GO:0003824
;
catalytic activity ( usg )
GO:0004073
;
aspartate-semialdehyde dehydrogenase activity ( usg )
GO:0005488
;
binding ( usg )
GO:0005515
;
protein binding ( usg )
GO:0005737
;
cytoplasm ( usg )
GO:0006520
;
amino acid metabolic process ( usg )
GO:0008152
;
metabolic process ( usg )
GO:0008652
;
amino acid biosynthetic process ( usg )
GO:0016620
;
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor ( usg )
GO:0046983
;
protein dimerization activity ( usg )
GO:0050661
;
NADP binding ( usg )
GO:0051287
;
NAD binding ( usg )
|
|
PID
|
1788658
|
EC number
(KEGG Pathway)
|
|
|
Verified Protein Starts
(data
compiled from literature and appropriate citations are available from EcoGene)
|
|
EcoGene
|
usg
(
EG11059
)
|
|
Number of removed
|
0 aa cleaved
|
|
SWISS-PROT
(
Show details
[
3
more]
)
|
Entry name(Acc.no)
|
ACCD_ECOLI
(
P08193
;
P76937; P78251
)
|
|
- Protein name
|
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta
|
|
- Synonyms
|
EC 6.4.1.2, ACCase beta chain
|
|
- Gene name
|
OrderedLocusNames=b2316, z3578, ECs3200;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
usg
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, 1.6 Angstrom Structure Of Esherichia Coli Aspartate- Semialdehyde Dehydrogenase.
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
USG-1 protein
|
|
PSI-BLAST
|
Aspartate-semialdehyde dehydrogenase
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein b2319 [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
AMIDATION
PROKAR_LIPOPROTEIN
ASD
|
| Sequences |
Amino acid
FASTA format
|
0001 MSEGWNIAVL GATGAVGEAL LETLAERQFP VGEIYALARN ESAGEQLRFG GKTITVQDAA EFDWTQAQLA
0071 FFVAGKEATA AWVEEATNSG CLVIDSSGLF ALEPDVPLVV PEVNPFVLTD YRNRNVIAVP DSLTSQLLAA
0141 LKPLIDQGGL SRISVTSLIS ASAQGKKAVD ALAGQSAKLL NGIPIDEEDF FGRQLAFNML PLLPDSEGSV
0211 REERRIVDEV RKILQDEGLM ISASVVQAPV FYGHAQMVNF EALRPLAAEE ARDAFVQGED IVLSEENEFP
0281 TQVGDASGTP HLSVGCVRND YGMPEQVQFW SVADNVRFGG ALMAVKIAEK LVQEYLY
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tgggttttaa cgccgttcat catccggcac
-070 gttaatctct tcttcatgct ctctgctgta acattggcag ggagctttgc tatttctgga gtaaaccacc
0001 atgtctgaag gctggaacat tgccgtcctg ggcgcaactg gcgctgtggg cgaagccctg cttgaaacgc
0071 tggctgaacg tcagttcccg gttggggaaa tttatgcact ggcacgtaac gaaagcgcag gcgaacaact
0141 gcgctttggt ggtaagacaa tcaccgtgca ggatgccgct gaattcgact ggacgcaggc gcagctggca
0211 ttttttgtcg caggcaaaga agctaccgct gcctgggttg aagaagcgac caactcaggt tgcctggtga
0281 tcgacagcag tggattgttt gctctcgaac ccgacgtacc gctggtggtg ccggaagtaa acccgtttgt
0351 actgacagat taccggaacc ggaatgtcat cgccgtacca gacagtctga ccagccagct gctggcggca
0421 ctgaaaccgt taatcgatca gggcggttta tcacgtatca gcgttaccag cctgatttca gcctccgccc
0491 agggcaaaaa agcggtcgat gcgttagcgg ggcagagtgc gaaattgctc aacggcattc cgattgacga
0561 agaagatttc ttcgggcgtc agctggcgtt caacatgctg ccgttactgc cggatagcga aggtagcgtg
0631 cgtgaagaac gtcgtatcgt tgacgaagta cgcaaaatcc tgcaggacga agggctgatg atttcggcta
0701 gcgtcgtcca ggcaccggta ttctacggtc atgcccagat ggtcaacttt gaagctctgc gtccactggc
0771 agcagaagaa gcgcgtgatg cgtttgttca aggcgaagat attgtgctct ctgaagagaa cgaattccca
0841 actcaggtag gtgatgcttc gggtacgccg catctttctg ttggctgcgt gcgtaatgac tacggtatgc
0911 cggagcaagt ccagttctgg tcggtggccg ataacgttcg ctttggcggc gcgctgatgg cagtaaaaat
0981 cgccgagaaa ctggtgcagg agtatctgta ctaatgtccg accagcaaca accgccagtt tataaaattg
1051 cgctgggcat tgagtacgac ggcagtaagt attacggctg gcaacggcag aacgaagtcc gcag
|
