|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
|
|
|
Deletion
|
OCL64
(D)
,
OCL64-11
(D)
,
OCL64-9
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
cvpA
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
cvpA
Search strains by all related name:
cvpA b2313 dedE ECK2307 JW2310
|
General information (Go to Linear View: )
|
|
Gene Name
|
cvpA
|
|
Alternative name
|
b2313,dedE,ECK2307,JW2310
|
|
Location, Length
|
2,428,297 - 2,428,785
(
-
)
;
52.34
min
;
489
(bp) ,
162
(aa)
|
|
Product
|
membrane protein required for colicin V production
|
|
Operon Name
|
cvpA-purF-ubiX
|
|
Note
|
GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane
|
|
Function
|
membrane; Colicin-related functions
|
|
Gene Ontology
|
GO:0005886
;
plasma membrane ( cvpA )
GO:0009403
;
toxin biosynthetic process ( cvpA )
GO:0016020
;
membrane ( cvpA )
GO:0016021
;
integral to membrane ( cvpA )
|
|
PID
|
1788652
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
CVPA_ECOLI
(
P08550
)
|
|
- Protein name
|
Colicin V production protein
|
|
- Synonyms
|
dedE protein, Pur regulon 18 kDa protein
|
|
- Gene name
|
Name=cvpA; Synonyms=dedE; OrderedLocusNames=b2313;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
cvpA
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Colicin V production protein
|
|
PSI-BLAST
|
Colicin V production protein
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
membrane protein required for colicin V production [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
|
|
MMBR References
|
J Bacteriol. 1989;171(6):3158-61.
Characterization of a purF operon mutation which affects colicin V production.
Fath MJ, Mahanty HK, Kolter R.
(
2542219
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MVWIDYAIIA VIAFSSLVSL IRGFVREALS LVTWGCAFFV ASHYYTYLSV WFTGFEDELV RNGIAIAVLF
0071 IATLIVGAIV NFVIGQLVEK TGLSGTDRVL GVCFGALRGV LIVAAILFFL DSFTGVSKSE DWSKSQLIPQ
0141 FSFIIRCFFD YLQSSSSFLP RA
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tttattgatg cgcgggaagg aaatccctac
-070 gcaaacgttt tctttttctg ttagaatgcg ccccgaacag gatgacaggg cgtaaaatcg tgggacacat
0001 atggtctgga ttgattacgc cataatcgcg gtgattgctt tttcctctct ggttagcctg atccgcggct
0071 ttgttcgtga agcgttatcg ctggtgacat ggggttgtgc tttctttgtt gccagtcatt actacactta
0141 cctgtcagtc tggtttacgg gctttgaaga cgaactggtt cgaaatggga ttgccatcgc ggtactgttt
0211 atcgctaccc tgatcgttgg tgctatcgtg aacttcgtga taggccagtt ggtggagaaa acggggttgt
0281 caggcaccga tcgggtgctg ggcgtctgtt tcggtgcgtt gcgcggtgtg ttgattgttg ctgccattct
0351 cttctttctc gactccttta ccggggtgtc gaaaagcgaa gactggagca aatcacagct gatcccgcaa
0421 ttcagtttta tcatcagatg tttttttgat tatctgcaaa gctcgtcaag tttcttgccc agagcgtaag
0491 tgctctgaga tgtggcttaa cgaggaaaaa gacgtatgtg cggtattgtc ggtatcgccg gtgttatgcc
0561 ggttaaccag tcgatttatg atgccttaa
|
