|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
DE(lpcA-proB)70
,
OCR36,37-1
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
lafU
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
lafU
Search strains by all related name:
lafU b0230 ECK0231 JW5812 mbhA o211
|
General information (Go to Linear View: )
|
|
Gene Name
|
lafU
|
|
Alternative name
|
b0230,ECK0231,JW5812,mbhA,o211
|
|
Location, Length
|
250,072 - 250,827
(
+
)
;
5.39
min
;
756
(bp) ,
251
(aa)
|
|
Product
|
|
|
Operon Name
|
lafU
|
|
Note
|
pseudogene, lateral flagellar motor protein fragment; GO_process: GO:0042330 - taxis
|
|
Function
|
|
|
Gene Ontology
|
GO:0009279
;
cell outer membrane ( mbhA )
|
|
PID
|
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
MBHA_ECOLI
(
Q47154
;
P75674; Q47682
)
|
|
- Protein name
|
MbhA protein.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=mbhA; OrderedLocusNames=b0230;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 CATCTGTTTG CCGGGCATCG CGTCTAAGGT
-070 AAAGCGGGCA GAAACCTCGG AAATACGCTC GGCCCCTTTG GTGACGACAA TAAAGTTGAT TGTCAACAGC
0001 gtcagtaaat ccgagcgtga aagcattatc gccgcgctgc acgggcagtc gatttttaac ggtggtgggc
0071 tgtcgccgtt aaataaaatc agcccgtctc atccgccaaa acctgccacc gtggcggtgc cggaagagac
0141 ggagaaaaaa gcgcgtgatg tgaatgagaa aacggcgctg ctgaagaaga aatccgccac cgagcttggt
0211 gagctggcaa ccagtatcaa caccattgcc cgtgatgcgc atatggaagc gaatctggag atggagattg
0281 ttccccaggg attacgcgtg ctgattaaag acgaccagaa ccgcaatatg tttgaacgcg gcagcgcgaa
0351 gattatgccg ttctttaaaa cgctgctggt ggagctcgcg ccagtgttcg actcgctcga taataaaatt
0421 attattaccg ggcataccga tgcgatggcc tacaaaaaca atatctacaa caactggaac ctttcgggtg
0491 accgcgcgct ttcggctcgt cgggtgctgg aagaggccgg aatgccggaa gataaagtga tgcaggtaag
0561 cgcaatggcg gaccagatgc tgctggattc caaaaatccg caaagcgcgg gcaaccggcg cattgagatt
0631 atggtgctga ccaaaagtgc gtccgatacg ctgtatcaat actttggtca gcatggggat aaagtggtgc
0701 agccgctggt gcaaaagctg gataagcagc aggtgctttc gcagcgaacg cgttaaATGC TGAATCTTTA
0771 CGCATTTCTC AAACCCTGAA ATCACTGTAT ACTTTACCAG TGTTGAGAGG TGAGCAATGC GTAAAATCAT
0841 TCATGTGGAT ATGGAC
|
