|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
13
(LD)
,
OCL67,68-3 (LD 13B_CRS)
(D)
,
OCL67,68-4 (LD 13B_PO)
(D)
,
OCL68
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
arnC
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
arnC
Search strains by all related name:
arnC b2254 ECK2247 JW2248 o322 o322b ORF2 pmrF yfbF
|
General information (Go to Linear View: )
|
|
Gene Name
|
arnC
|
|
Alternative name
|
b2254,ECK2247,JW2248,o322,o322b,ORF2,pmrF,yfbF
|
|
Location, Length
|
2,365,093 - 2,366,061
(
+
)
;
50.98
min
;
969
(bp) ,
322
(aa)
|
|
Product
|
undecaprenyl phosphate-L-Ara4FN transferase
|
|
Operon Name
|
arnBCADTEF
|
|
Note
|
putative sugar transferase
|
|
Function
|
putative enzyme; Not classified
|
|
Gene Ontology
|
GO:0005515
;
protein binding ( arnC )
GO:0005886
;
plasma membrane ( arnC )
GO:0008610
;
lipid biosynthetic process ( arnC )
GO:0009103
;
lipopolysaccharide biosynthetic process ( arnC )
GO:0009245
;
lipid A biosynthetic process ( arnC )
GO:0016020
;
membrane ( arnC )
GO:0016021
;
integral to membrane ( arnC )
GO:0016740
;
transferase activity ( arnC )
GO:0016757
;
transferase activity, transferring glycosyl groups ( arnC )
GO:0016780
;
phosphotransferase activity, for other substituted phosphate groups ( arnC )
GO:0046677
;
response to antibiotic ( arnC )
|
|
PID
|
1788588
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
ARNC_ECOLI
(
P77757
;
P78179
)
|
|
- Protein name
|
Glycosyl transferase arnC
|
|
- Synonyms
|
EC 2.-.-.-, Ara4N transferase, Polymixin resistance protein pmrF
|
|
- Gene name
|
Name=arnC; Synonyms=pmrF; OrderedLocusNames=b2254;
|
| Sequences |
Amino acid
FASTA format
|
0001 MFEIHPVKKV SVVIPVYNEQ ESLPELIRRT TTACESLGKE YEILLIDDGS SDNSAHMLVE ASQAENSHIV
0071 SILLNRNYGQ HSAIMAGFSH VTGDLIITLD ADLQNPPEEI PRLVAKADEG YDVVGTVRQN RQDSWFRKTA
0141 SKMINRLIQR TTGKAMGDYG CMLRAYRRHI VDAMLHCHER STFIPILANI FARRAIEIPV HHAEREFGES
0211 KYSFMRLINL MYDLVTCLTT TPLRMLSLLG SIIAIGGFSI AVLLVILRLT FGPQWAAEGV FMLFAVLFTF
0281 IGAQFIGMGL LGEYIGRIYT DVRARPRYFV QQVIRPSSKE NE
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TAGCGAACGC ATCTGTTCTT TGCCGCTGTT
-070 CCCGGATATG ACTACCGCCG ATGCCGACCA TGTCATCACA GCCCTTCAGC AACTCGCAGG ACAATAAGCC
0001 atgtttgaaa tccaccctgt taagaaagtc tcggtggtta ttcccgttta taacgagcag gaaagcttac
0071 cggaattaat caggcgcacc accacagcct gtgaatcgtt ggggaaagag tatgagatcc tgctgattga
0141 tgacggcagt agcgataatt ccgcgcatat gctggtcgaa gcctcacaag cggagaacag ccatattgtg
0211 tctattttgc ttaaccgcaa ttacgggcaa cattcagcga ttatggcggg attcagtcac gttactggcg
0281 acttaattat tacccttgat gccgatctcc agaatccgcc agaagaaatc ccccgcctgg tggcaaaagc
0351 cgatgaaggt tacgacgtgg tagggactgt acgccagaac cgccaggaca gctggtttcg taaaaccgct
0421 tcgaagatga ttaaccggct tattcagcgc accactggca aagcgatggg tgattacggt tgtatgctgc
0491 gcgcctatcg ccgtcatatt gtcgatgcga tgttgcactg ccatgaacgc agcaccttta tcccgattct
0561 ggcgaatatc ttcgcccgcc gtgccattga aattccagta catcatgccg agcgtgagtt tggtgaatcc
0631 aaatacagtt ttatgcgcct gattaatttg atgtacgacc tggtgacctg ccttaccaca acgccgctac
0701 gtatgctgag tctgctcggc agcattattg cgattggagg ttttagcatt gcggtgctgc tggtgatttt
0771 acgcctgacc ttcggaccac aatgggcggc agaaggcgtc tttatgctat ttgccgtgct gtttactttt
0841 attggcgctc agtttatcgg catgggatta ctcggtgaat atatcggcag gatctacacc gatgtccgcg
0911 cccgcccccg ctattttgtt cagcaagtta tccgtccatc cagcaaggaa aatgaataaT GAAAACCGTC
0981 GTTTTTGCCT ACCACGATAT GGGATGCCTC GGTATTGAAG CCCTGCTGGC TGCCGGTTAC GAAATTAGCG
1051 CCATTTTTAC CCATACTGA
|
