|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCL73-3
(D)
,
OCL73-4
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yejB
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yejB
Search strains by all related name:
yejB b2178 ECK2172 JW2166
|
General information (Go to Linear View: )
|
|
Gene Name
|
yejB
|
|
Alternative name
|
b2178,ECK2172,JW2166
|
|
Location, Length
|
2,272,201 - 2,273,295
(
+
)
;
48.97
min
;
1095
(bp) ,
364
(aa)
|
|
Product
|
microcin C transporter YejABEF, permease subunit; ABC family
|
|
Operon Name
|
yejABEF
|
|
Note
|
putative transport system permease protein; membrane component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane
|
|
Function
|
putative transport; Not classified
|
|
Gene Ontology
|
GO:0005215
;
transporter activity ( yejB )
GO:0005886
;
plasma membrane ( yejB )
GO:0006810
;
transport ( yejB )
GO:0016020
;
membrane ( yejB )
GO:0016021
;
integral to membrane ( yejB )
|
|
PID
|
1788504
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
YEJB_ECOLI
(
P33914
;
P76448
)
|
|
- Protein name
|
Hypothetical ABC transporter permease protein yejB.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yejB; OrderedLocusNames=b2178, z3437, ECs3070;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yejB
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Inner membrane ABC transporter permease protein yejB
|
|
PSI-BLAST
|
Inner membrane ABC transporter permease protein yejB
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
putative transport system permease protein [Escherichia coli O157:H7 str. Sakai]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MGAYLIRRLL LVIPTLWAII TINFFIVQIA PGGPVDQAIA AIEFGNAGVL PGAGGEGVRA SHAQTGVGNI
0071 SDSNYRGGRG LDPEVIAEIT HRYGFDKPIH ERYFKMLWDY IRFDFGDSLF RSASVLTLIK DSLPVSITLG
0141 LWSTLIIYLV SIPLGIRKAV YNGSRFDVWS SAFIIIGYAI PAFLFAILLI VFFAGGSYFD LFPLRGLVSA
0211 NFDSLPWYQK ITDYLWHITL PVLATVIGGF AALTMLTKNS FLDEVRKQYV VTARAKGVSE KNILWKHVFR
0281 NAMLLVIAGF PATFISMFFT GSLLIEVMFS LNGLGLLGYE ATVSRDYPVM FGTLYIFTLI GLLLNIVSDI
0351 SYTLVDPRID FEGR
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 GCCGGCCGTG CGCCCCATCT ATAGCCTCGG
-070 TATCGATACC TGGTGGTATG ACGTCAATAA AGCGGCCAAA CTGCCGTCCG CCAGCAAACA GGGAGAGTAG
0001 atgggcgctt acctgattcg ccgtctgttg ctggtgatcc caacattatg ggcgattatc accatcaact
0071 ttttcatcgt gcaaattgcg cctggcggtc cggtcgacca ggccatcgcc gccattgagt ttggtaatgc
0141 cggagtatta cccggcgcag gcggtgaagg tgttcgtgcc agccatgcgc aaacgggtgt cggcaatatc
0211 agcgacagta attaccgtgg cggacgcgga ttagatccag aagtgatcgc tgagatcact catcgctacg
0281 gttttgataa gccgatccac gaacgttact tcaaaatgct ctgggactac atccgctttg attttggcga
0351 tagcctgttt cgcagcgcct cggtgctgac gctgattaaa gacagtctgc cggtttccat caccctcgga
0421 ttgtggagca cgctgattat ctatctggtg tcgattccgt taggcattcg caaagctgtt tataatggga
0491 gccgctttga cgtctggagt agcgcattta tcatcatcgg ctacgccatt ccggcctttt tgtttgccat
0561 cctgctgatt gtcttcttcg cgggcggcag ctatttcgac ctgttccctc tacgcggcct ggtttccgct
0631 aactttgatt cgctgccgtg gtatcagaaa atcaccgatt atctgtggca tatcacgctg ccggtgctgg
0701 cgacagtgat tggtggcttt gcggcgctga ccatgctgac aaaaaactca ttccttgatg aagtgcgcaa
0771 gcaatacgtg gtgaccgcgc gtgcgaaagg ggtaagtgaa aaaaatattc tctggaaaca tgtgttccgc
0841 aacgccatgc tgctggtgat tgccggtttt ccggcgacgt ttatcagcat gttttttacc ggctcgctgc
0911 tgattgaggt gatgttttca ctcaatggtc tgggcttact gggctacgaa gcgaccgtct cgcgcgatta
0981 tcctgtaatg tttggtacct tgtatatttt caccctgatt ggcctgctgc tgaatattgt cagtgatatc
1051 agctatacgc tggttgatcc gcgtattgat tttgagggac gttaaTGTCG CGACTCAGCC CCGTCAATCA
1121 GGCCCGTTGG GCGCGTTTTC GTCATAACCG TCGCGGCTAC TGGTCGTTAT GGATTTTCCT CGTCTTGTTT
1191 GGTTT
|
