|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
16-1-2
(LD)
,
DE(sbcB-rfb)202
,
DE(his-dcd)453
,
OCL74-2,75-5 (LD 16-1-2_CRS)
(D)
,
OCL74-2,75-6 (LD 16-1-2_P/O)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
wcaE
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
wcaE
Search strains by all related name:
wcaE b2055 ECK2049 f248 JW2040
|
General information (Go to Linear View: )
|
|
Gene Name
|
wcaE
|
|
Alternative name
|
b2055,ECK2049,f248,JW2040
|
|
Location, Length
|
2,126,928 - 2,127,674
(
-
)
;
45.84
min
;
747
(bp) ,
248
(aa)
|
|
Product
|
putative glycosyl transferase
|
|
Operon Name
|
wcaCDEF-gmd-fcl-gmm-wcaI-cpsBG-wcaJ-wzxC
|
|
Note
|
putative colanic acid biosynthesis glycosyl transferase; GO_process: GO:0009242 - colanic acid biosynthetic process
|
|
Function
|
putative enzyme; Not classified
|
|
Gene Ontology
|
GO:0009103
;
lipopolysaccharide biosynthetic process ( wcaE )
GO:0016740
;
transferase activity ( wcaE )
|
|
PID
|
1788368
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
WCAE_ECOLI
(
P71239
;
P76384
)
|
|
- Protein name
|
Putative colanic acid biosynthesis glycosyl transferase wcaE.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=wcaE; OrderedLocusNames=b2055;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
wcaE
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Putative colanic acid biosynthesis glycosyl transferase wcaE
|
|
PSI-BLAST
|
Polypeptide N-acetylgalactosaminyltransferase 11
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
predicted glycosyl transferase [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
MICROBODIES_CTER
|
| Sequences |
Amino acid
FASTA format
|
0001 MLLSIITVAF RNLEGIVKTH ASLAHLAQVE DISFEWIVVD GGSNDGTREY LENLNGIFNL RFVSEPDNGI
0071 YDAMNKGIAM AQGKFALFLN SGDIFHQNAA NFVRKLKMQK DNVMITGDAL LDFGDGHKIK RSAKPGWYIY
0141 HSLPASHQAI FFPVSGLKKW RYDLEYKVSS DYALAAKMYK AGYAFKKLNG LVSEFSMGGV STTNNMELCA
0211 DAKKVQRQIL HVPGFWAELS WHLRQRTTSK TKALYNKV
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ttttttaccg gttcgatatt tagcccggaa
-070 tatgcatttt taatcgtctg tccgtttatt ttgcgaaaag cgttaaatat tacgaggtaa gaataagaac
0001 atgttgctta gcataatcac tgtcgcgttt cgtaacctcg aagggatagt caaaacacat gcctcgctgg
0071 cgcatctggc gcaggtggaa gatatcagct tcgaatggat tgttgtcgat ggcggttcca acgacggcac
0141 ccgtgagtat ctggaaaatc tcaatggtat ctttaaccta cgctttgtca gcgagccaga taacggtatc
0211 tacgacgcca tgaacaaagg cattgcgatg gcacaaggca agttcgcgtt gtttctcaat tcgggcgata
0281 tttttcatca gaatgccgca aattttgtcc gtaagttaaa aatgcaaaaa gataacgtga tgatcaccgg
0351 cgatgcgctg ctggattttg gcgacgggca taaaattaaa cgtagcgcca aaccgggctg gtatatttat
0421 cacagcctgc ccgccagtca tcaggcgata tttttccctg tatccggctt gaaaaaatgg cgttatgacc
0491 tggaatataa agtttcttcc gactacgcgc tggcagccaa aatgtataaa gccggttatg catttaaaaa
0561 actcaatggc ctggtgtctg aattttccat gggtggggta tctaccacca ataatatgga attgtgtgct
0631 gacgcgaaaa aagtccaacg acaaatatta catgtgcctg gcttttgggc tgaattatcc tggcatttac
0701 gccaacgtac tacctcaaag acgaaagcct tatataacaa agtctgaata taaggaaaac caatgcaaga
0771 tttaagcggt ttctcggtgc cgaaagggtt ccggggcggc aacgctatta aagtgcaatt atggtgggca
0841 gtacagg
|
