|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
16-1-2
(LD)
,
DE(sbcB-rfb)202
,
DE(his-dcd)453
,
OCL74-2,75-5 (LD 16-1-2_CRS)
(D)
,
OCL74-2,75-6 (LD 16-1-2_P/O)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
wcaI
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
wcaI
Search strains by all related name:
wcaI b2050 ECK2044 f407 JW2035 yefD
|
General information (Go to Linear View: )
|
|
Gene Name
|
wcaI
|
|
Alternative name
|
b2050,ECK2044,f407,JW2035,yefD
|
|
Location, Length
|
2,122,547 - 2,123,770
(
-
)
;
45.75
min
;
1224
(bp) ,
407
(aa)
|
|
Product
|
putative glycosyl transferase
|
|
Operon Name
|
wcaCDEF-gmd-fcl-gmm-wcaI-cpsBG-wcaJ-wzxC
|
|
Note
|
putative colanic biosynthesis glycosyl transferase; GO_process: GO:0009242 - colanic acid biosynthetic process
|
|
Function
|
putative enzyme; Not classified
|
|
Gene Ontology
|
GO:0009058
;
biosynthetic process ( wcaI )
GO:0009103
;
lipopolysaccharide biosynthetic process ( wcaI )
GO:0016740
;
transferase activity ( wcaI )
|
|
PID
|
1788363
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
WCAI_ECOLI
(
P32057
)
|
|
- Protein name
|
Putative colanic acid biosynthesis glycosyl transferase wcaI.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=wcaI; OrderedLocusNames=b2050;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
wcaI
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Putative colanic acid biosynthesis glycosyl transferase wcaI
|
|
PSI-BLAST
|
Putative colanic acid biosynthesis glycosyl transferase wcaI
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
predicted glycosyl transferase [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MKILVYGINY SPELTGIGKY TGEMVEWLAA QGHEVRVITA PPYYPQWQVG ENYSAWRYKR EEGAATVWRC
0071 PLYVPKQPST LKRLLHLGSF AVSSFFPLMA QRRWKPDRII GVVPTLFCAP GMRLLAKLSG ARTVLHIQDY
0141 EVDAMLGLGL AGKGKGGKVA QLATAFERSG LHNVDNVSTI SRSMMNKAIE KGVAAENVIF FPNWSEIARF
0211 QHVADADVDA LRNQLDLPDN KKIILYSGNI GEKQGLENVI EAADRLRDEP LIFAIVGQGG GKARLEKMAQ
0281 QRGLRNMQFF PLQSYDALPA LLKMGDCHLV VQKRGAADAV LPSKLTNILA VGGNAVITAE AYTELGQLCE
0351 TFPGIAVCVE PESVEALVAG IRQALLLPKH NTVAREYAER TLDKENVLRQ FINDIRG
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 accgctggct gacgtcggac gcgctgctcg
-070 ccagtgataa tgttcatgct aacagccgcg cctattttct cgctgagaag cgtaccggag tacccggatt
0001 atgaaaatac tggtctacgg cattaactac tcgccggagt taaccggcat cggcaaatac accggcgaga
0071 tggtggaatg gctggcggca caaggtcatg aggtgcgggt cattaccgca ccgccttact acccgcaatg
0141 gcaggtgggc gagaactatt ccgcctggcg ctacaaacga gaagaggggg ccgccacggt gtggcgctgc
0211 ccgctgtatg tgccaaaaca gccgagcacc ctgaaacgcc tgttgcatct gggcagtttt gccgtcagca
0281 gtttctttcc gctgatggcg caacgtcgct ggaagccgga tcgcattatt ggcgtggtgc caacgctgtt
0351 ttgcgcgccg ggaatgcgcc tgctggcgaa actctctggt gcgcgtaccg tgctgcatat tcaggattac
0421 gaagtggacg ccatgctggg gctgggcctt gccggaaaag gcaaaggcgg caaagtggca cagctggcaa
0491 cggcgttcga acgtagcgga ctgcataacg tcgataacgt ctccacgatt tcgcgttcga tgatgaataa
0561 agccatcgaa aaaggcgtgg cggcggaaaa cgtcatcttc ttccccaact ggtcggaaat tgcccgtttt
0631 cagcatgttg cagatgccga tgttgatgcc cttcgtaacc agcttgacct gccggataac aaaaaaatca
0701 ttctttactc cggcaatatt ggtgaaaagc aggggctgga aaacgttatt gaagctgccg atcgtctgcg
0771 cgatgaaccg ctgatttttg ccattgtcgg gcagggcggc ggcaaagcgc ggctggaaaa aatggcgcag
0841 cagcgtggac tgcgcaacat gcaatttttc ccgctgcaat cgtatgacgc tttacccgca ctgctgaaga
0911 tgggcgattg ccatctggtg gtgcaaaaac gcggcgcggc agatgccgta ttgccgtcga aactgaccaa
0981 tattctggca gtaggcggta acgcggtgat tactgctgaa gcctacacag aactggggca gctttgcgaa
1051 acctttccgg gcattgcggt ttgcgttgaa ccggaatcgg tcgaggcgct ggtggcgggg atccgtcagg
1121 cgctcctgct gcccaaacac aacacggtgg cacgtgaata tgccgaacgc acgctcgata aagagaacgt
1191 gttacgtcaa tttataaatg atattcgggg ataattatgg cgcagtcgaa actctatcca gttgtgatgg
1261 caggtggctc cggtagccgc ttatggccgc tttcccgcgt actttatccc aagcagtttt tatg
|
