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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Deletion
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16-1-2
(LD)
,
DE(sbcB-rfb)202
,
DE(his-dcd)453
,
OCL74-2,75-5 (LD 16-1-2_CRS)
(D)
,
OCL74-2,75-6 (LD 16-1-2_P/O)
(D)
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Related gene (W3110 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
wcaN
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Related strains
|
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Strains Search
|
Search strains by gene name:
wcaN
Search strains by all related name:
wcaN b2042 ECK2036 galF JW2027 wcaN
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General information (Go to Linear View: )
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Gene Name
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wcaN
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Alternative name
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b2042,ECK2036,galF,JW2027,wcaN
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Location, Length
|
2,111,458 - 2,112,351
(
-
)
;
45.51
min
;
894
(bp) ,
297
(aa)
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Product
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putative regulatory subunit for GalU
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Operon Name
|
galF
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Note
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GO_component: GO:0005737 - cytoplasm; GO_process: GO:0009226 - nucleotide-sugar biosynthetic process
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Function
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putative enzyme; Central intermediary metabolism: Sugar-nucleotide biosynthesis, conversions
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Gene Ontology
|
GO:0003983
;
UTP:glucose-1-phosphate uridylyltransferase activity ( galF )
GO:0006011
;
UDP-glucose metabolic process ( galF )
GO:0009058
;
biosynthetic process ( galF )
GO:0009103
;
lipopolysaccharide biosynthetic process ( galF )
GO:0016740
;
transferase activity ( galF )
GO:0016779
;
nucleotidyltransferase activity ( galF )
GO:0030234
;
enzyme regulator activity ( galF )
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PID
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1788355
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EC number
(KEGG Pathway)
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SWISS-PROT
(
Show details
[
1
more]
)
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Entry name(Acc.no)
|
GALF_ECOLI
(
P78083
;
P71245; P97192
)
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- Protein name
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UTP--glucose-1-phosphate uridylyltransferase
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- Synonyms
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EC 2.7.7.9, UDP-glucose pyrophosphorylase, UDPGP, Alpha-D-glucosyl-1-phosphate uridylyltransferase, Uridine diphosphoglucose pyrophosphorylase
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- Gene name
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Name=galF; Synonyms=wcaN; OrderedLocusNames=b2042, z3205, ECs2846;
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MMBR References
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Mol Microbiol. 1996;22(5):827-40.
The GalF protein of Escherichia coli is not a UDP-glucose pyrophosphorylase but interacts with the GalU protein possibly to regulate cellular levels of UDP-glucose.
Marolda CL, Valvano MA.
(
8971705
)
|
J Bacteriol. 1996;178:4885-4893
Organization of the Escherichia coli K-12 gene cluster responsible for production of the extracellular polysaccharide colanic acid.
Stevenson, G., K. Andrianopoulos, M. Hobbs, and P. R. Reeves.
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| Sequences |
Amino acid
FASTA format
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0001 MTNLKAVIPV AGLGMHMLPA TKAIPKEMLP IVDKPMIQYI VDEIVAAGIK EILLVTHASK NAVENHFDTS
0071 YELESLLEQR VKRQLLAEVQ SICPPGVTIM NVRQGEPLGL GHSILCARPA IGDNPFVVVL PDVVIDDASA
0141 DPLRYNLAAM IARFNETGRS QVLAKRMPGD LSEYSVIQTK EPLDREGKVS RIVEFIEKPD QPQTLDSDIM
0211 AVGRYVLSAD IWPELERTQP GAWGRIQLTD AIAELAKKQS VDAMLMTGDS YDCGKKMGYM QAFVKYGLRN
0281 LKEGAKFRKG IEKLLSE
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 acatcacaag taattcagta atcaattcag
-070 ggtaattgat gctggcgaaa aaaatcgaac aagctataat tcagcaacca ttttacaggt ggatgaaata
0001 atgacgaatt taaaagcagt tattcctgta gcgggtctcg ggatgcatat gttgcctgcc actaaggcga
0071 tacccaaaga gatgctacca atcgtcgaca agccaatgat tcagtacatt gttgacgaga ttgtggctgc
0141 agggatcaaa gaaatcctcc tggtaactca cgcgtccaag aacgcggtcg aaaaccactt cgacacctct
0211 tatgagttag aatcactcct tgagcagcgc gtgaagcgtc aactgctggc ggaagtacag tccatctgtc
0281 cgccgggcgt gaccattatg aacgtgcgtc agggcgaacc tttaggttta ggccactcca ttttgtgtgc
0351 gcgacctgcc attggtgaca acccatttgt cgtggtactg ccagacgttg tgatcgacga tgccagcgcc
0421 gacccgctac gttacaacct tgctgccatg attgcacgtt tcaacgaaac gggccgcagc caggtgctgg
0491 caaaacgtat gccgggtgac ctctctgaat actccgtcat ccagactaaa gagccgctgg accgtgaggg
0561 taaagtcagc cgcattgttg aatttatcga aaaaccggat cagccgcaga cgctggactc agacatcatg
0631 gccgtaggtc gctatgtgct ttctgccgat atttggccgg aactggaacg tactcagcct ggtgcatggg
0701 gacgtattca gctgactgat gctattgccg agctggcgaa aaaacaatcc gttgatgcaa tgctgatgac
0771 cggcgacagt tacgactgcg gcaaaaaaat gggctatatg caggcgtttg tgaagtatgg cctacgcaac
0841 ctgaaagaag gggcgaagtt ccgtaaaggt attgagaagc tgttaagcga ataatgaaaa tctgaccgga
0911 tgtaacggtt gataagaaaa ttataacggc agtgaaaatt cgcagcaaaa gtaatttgtt gcgaatcttc
0981 ctgccgttgt ttta
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