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PEC Original Annotations
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|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
LD3-5-1
(LD)
,
OCL77
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yedA
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yedA
Search strains by all related name:
yedA b1959 ECK1957 JW1942
|
General information (Go to Linear View: )
|
|
Gene Name
|
yedA
|
|
Alternative name
|
b1959,ECK1957,JW1942
|
|
Location, Length
|
2,027,563 - 2,028,483
(
+
)
;
43.70
min
;
921
(bp) ,
306
(aa)
|
|
Product
|
amino acid exporter for phenylalanine, threonine
|
|
Operon Name
|
yedA
|
|
Note
|
putative transmembrane subunit; GO_component: GO:0009274 - peptidoglycan-based cell wall
|
|
Function
|
putative membrane; Not classified
|
|
Gene Ontology
|
GO:0005886
;
plasma membrane ( yedA )
GO:0006810
;
transport ( yedA )
GO:0016020
;
membrane ( yedA )
GO:0016021
;
integral to membrane ( yedA )
|
|
PID
|
1788269
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YEDA_ECOLI
(
P09185
)
|
|
- Protein name
|
Hypothetical transport protein yedA.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yedA; OrderedLocusNames=b1959, c2378, z3050, ECs2697;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yedA
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Inner membrane transport protein yedA
|
|
PSI-BLAST
|
Triose phosphate/phosphate translocator, chloroplast precursor
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
putative transmembrane subunit [Escherichia coli O157:H7 EDL933]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
LEUCINE_ZIPPER
|
| Sequences |
Amino acid
FASTA format
|
0001 MRFRQLLPLF GALFALYIIW GSTYFVIRIG VESWPPLMMA GVRFLAAGIL LLAFLLLRGH KLPPLRPLLN
0071 AALIGLLLLA VGNGMVTVAE HQNVPSGIAA VVVATVPLFT LCFSRLFGIK TRKLEWVGIA IGLAGIIMLN
0141 SGGNLSGNPW GAILILIGSI SWAFGSVYGS RITLPVGMMA GAIEMLAAGV VLMIASMIAG EKLTALPSLS
0211 GFLAVGYLAL FGSIIAINAY MYLIRNVSPA LATSYAYVNP VVAVLLGTGL GGETLSKIEW LALGVIVFAV
0281 VLVTLGKYLF PAKPVVAPVI QDASSE
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TCAACATTTT TTTAACAATC AAGTGCAATT
-070 ATATCTCTCG CCAGCAGAAT GATTTTCACG TTTACTATGA ACCACCTTTT TATTTCCACC GTGAGGGATT
0001 atgcgtttcc gccagttgtt accgcttttt ggcgcgctgt ttgcgttgta tatcatttgg ggctcaacct
0071 attttgtcat tcggattggc gtggaaagct ggcctccgtt aatgatggcg ggcgttcgat tcctggcagc
0141 cggtatttta ttgctggcat ttttgctact gcgcggacac aaactccccc cgctacgtcc gctgctcaat
0211 gccgcgctga ttggcctgtt attgctggct gtcggtaatg gcatggtgac ggttgccgaa catcaaaatg
0281 ttccttccgg catcgccgcc gtagtggttg caaccgtgcc cctctttacc ctgtgcttca gccgcctgtt
0351 tggcattaaa acgcgcaaac tggaatgggt gggtattgcc attgggcttg ccggaatcat catgctcaat
0421 agcggtggaa atttaagcgg caatccgtgg ggcgcgattc tgattttaat cggctcgatt agctgggcgt
0491 ttggctcagt ttatggctcg cgcattacct tacctgtagg gatgatggcg ggtgcgattg agatgctggc
0561 ggcaggcgtg gtgttaatga tcgcgtcgat gattgcgggt gaaaaactga cggcgctccc ttccctttca
0631 ggcttccttg cggtcggcta tctggcgctg tttggttcga ttatcgccat caacgcttat atgtatttaa
0701 tccgtaatgt cagtccggct ctcgccacca gctacgctta cgttaacccg gtggtcgcgg tcttgctggg
0771 tacgggactg ggtggagaaa cactgtcgaa gattgaatgg ctggcgctcg gcgtaattgt cttcgcggtg
0841 gtactggtca cgttgggaaa atatctcttc ccggcaaaac ccgtagttgc gccagttatt caggacgcat
0911 caagcgagta aATGAATCCC CTGCGTGTCG ATCTGCGCGC TGGCACCTTC GCCGCAGATC CACTCTTCCA
0981 GACGCTCGGT AAGCGCTTCA TCCGTCAGCT TCTCGCGCCC A
|
