|
PEC Original Annotations
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|
Essentiality
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Class
|
non-essential
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References (PMID)
|
|
|
Deletion
|
DE(PLK1608)
,
OCL90-3
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
dtpA
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
dtpA
Search strains by all related name:
dtpA b1634 ECK1630 JW1626 o500 o500b tppB ydgR
|
General information (Go to Linear View: )
|
|
Gene Name
|
dtpA
|
|
Alternative name
|
b1634,ECK1630,JW1626,o500,o500b,tppB,ydgR
|
|
Location, Length
|
1,710,793 - 1,712,295
(
+
)
;
36.87
min
;
1503
(bp) ,
500
(aa)
|
|
Product
|
dipeptide and tripeptide permease A
|
|
Operon Name
|
tppB
|
|
Note
|
putative transport protein; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane
|
|
Function
|
putative transport; Not classified
|
|
Gene Ontology
|
GO:0005215
;
transporter activity ( tppB )
GO:0006810
;
transport ( tppB )
GO:0006857
;
oligopeptide transport ( tppB )
GO:0015031
;
protein transport ( tppB )
GO:0015198
;
oligopeptide transporter activity ( tppB )
GO:0016020
;
membrane ( tppB )
GO:0016021
;
integral to membrane ( tppB )
|
|
PID
|
1787922
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
3
more]
)
|
Entry name(Acc.no)
|
YHIP_ECOLI
(
P36837
;
P76706
)
|
|
- Protein name
|
Hypothetical transporter yhiP.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yhiP; OrderedLocusNames=b3496;
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
tppB
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Tripeptide permease tppB
|
|
PSI-BLAST
|
High-affinity glucose transporter SNF3
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
putative transport protein [Shigella boydii Sb227]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
GLYCOSAMINOGLYCAN
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
HIS_ACID_PHOSPHAT_2
PTR2_1
PTR2_2
|
| Sequences |
Amino acid
FASTA format
|
0001 MSTANQKPTE SVSLNAFKQP KAFYLIFSIE LWERFGYYGL QGIMAVYLVK QLGMSEADSI TLFSSFSALV
0071 YGLVAIGGWL GDKVLGTKRV IMLGAIVLAI GYALVAWSGH DAGIVYMGMA AIAVGNGLFK ANPSSLLSTC
0141 YEKNDPRLDG AFTMYYMSVN IGSFFSMIAT PWLAAKYGWS VAFALSVVGL LITIVNFAFC QRWVKQYGSK
0211 PDFEPINYRN LLLTIIGVVA LIAIATWLLH NQEVARMALG VVAFGIVVIF GKEAFAMKGA ARRKMIVAFI
0281 LMLEAIIFFV LYSQMPTSLN FFAIRNVEHS ILGLAVEPEQ YQALNPFWII IGSPILAAIY NKMGDTLPMP
0351 TKFAIGMVMC SGAFLILPLG AKFASDAGIV SVSWLVASYG LQSIGELMIS GLGLAMVAQL VPQRLMGFIM
0421 GSWFLTTAGA NLIGGYVAGM MAVPDNVTDP LMSLEVYGRV FLQIGVATAV IAVLMLLTAP KLHRMTQDDA
0491 ADKAAKAAVA
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 CTGCCGTTTC CCCTCCCACT ATAACAATTG
-070 CGCGTATGTT TTTTATACAT AACGCGAGAA AGCACCCCCG TTAATATGGG ATGTAAAAAA AGAGGTAAAA
0001 gtgtccactg caaaccaaaa accaactgaa agcgtcagtt tgaacgcttt caaacaaccg aaggcgttct
0071 atctcatctt ctcgattgag ttatgggaac gttttggtta ttacggccta caaggaatta tggctgttta
0141 cctggttaaa caactgggta tgtctgaagc ggattcaatc acccttttct cttcctttag tgccctggtt
0211 tatggtctgg tcgctatcgg cggctggtta ggtgacaagg tactgggtac taaacgcgta attatgctcg
0281 gcgctattgt gctggcgatt ggttatgctc tggttgcctg gtctggtcac gacgccggta tcgtttatat
0351 gggtatggcg gctattgcgg tcggtaacgg cctgtttaaa gctaacccgt cttctctgct ttctacatgc
0421 tatgagaaaa acgacccgcg tctggacggt gcattcacca tgtactacat gtccgtcaac atcggctctt
0491 tcttctctat gattgctacg ccgtggctgg ccgcgaaata cggctggagt gttgcgtttg cgttgagcgt
0561 tgtaggcctg ctgatcacta tcgttaactt cgccttctgc caacgctggg ttaaacagta cggttcaaaa
0631 ccagacttcg agcctatcaa ctaccgtaac ctgctgctga ccattattgg tgttgtggca ctgatcgcta
0701 tcgccacctg gctgctgcac aatcaggaag ttgcgcgtat ggcgctgggc gttgttgcct tcggtatcgt
0771 ggttatcttc ggtaaagaag ccttcgcgat gaaaggtgct gcgcgtcgta aaatgatcgt tgccttcatc
0841 ctgatgctcg aagccattat cttcttcgtg ctgtacagcc agatgccaac gtcactgaac ttctttgcga
0911 ttcgtaacgt tgagcactcc attctgggtc tggccgtaga acctgagcag tatcaggcac tgaacccgtt
0981 ctggatcatc atcggtagtc cgattctggc cgctatctat aacaagatgg gcgataccct gccgatgcca
1051 accaagtttg caatcggcat ggtgatgtgt tctggtgcgt tcctgattct gccgctgggt gcgaaattcg
1121 cgtctgacgc tggtatcgtg tctgtaagct ggctggtcgc aagctatggc ctgcagagca tcggggaact
1191 gatgatctct ggtctgggtc tggcaatggt tgctcaactc gttccgcagc gtctgatggg cttcattatg
1261 ggtagctggt tcctgaccac tgccggtgca aacctgattg gtggttatgt tgcgggtatg atggctgtgc
1331 cggataacgt taccgatccg ctgatgtcac tggaagtcta tggtcgcgta ttcttgcaga ttggtgtcgc
1401 tactgccgtt attgcagtac tgatgctgct gaccgcgccg aaactgcacc gcatgacgca ggatgacgct
1471 gcagacaaag cggcgaaagc agccgtagcg taaAATTCAG GGAAACTCTT TTACAAGCCG CTAACTTTTC
1541 GTTAGCGGCT TTTTTTTTGT TCAGCAACGC ACTACCATAC TTTAAACCAC AGACAAAAGG AGT
|
