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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Deletion
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DE(PLK1608)
,
OCL90-3
(D)
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Related gene (W3110 PEC)
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Gene Search
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Search MG1655 PEC by gene name:
rsxC
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Related strains
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Strains Search
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Search strains by gene name:
rsxC
Search strains by all related name:
rsxC b1629 ECK1625 JW1621 o740 rnfC ydgN
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General information (Go to Linear View: )
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Gene Name
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rsxC
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Alternative name
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b1629,ECK1625,JW1621,o740,rnfC,ydgN
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Location, Length
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1,704,943 - 1,707,165
(
+
)
;
36.75
min
;
2223
(bp) ,
740
(aa)
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Product
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electron transport complex protein required for the reduction of SoxR; predicted membrane-associated NADH oxidoreductase
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Operon Name
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ydgK-rsxABCDGE-nth
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Note
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GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane
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Function
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putative membrane; Not classified
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Gene Ontology
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GO:0005506
;
iron ion binding ( rnfC )
GO:0005886
;
plasma membrane ( rnfC )
GO:0006118
;
electron transport ( rnfC )
GO:0006810
;
transport ( rnfC )
GO:0009055
;
electron carrier activity ( rnfC )
GO:0010181
;
FMN binding ( rnfC )
GO:0016020
;
membrane ( rnfC )
GO:0016491
;
oxidoreductase activity ( rnfC )
GO:0016651
;
oxidoreductase activity, acting on NADH or NADPH ( rnfC )
GO:0046872
;
metal ion binding ( rnfC )
GO:0051287
;
NAD binding ( rnfC )
GO:0051536
;
iron-sulfur cluster binding ( rnfC )
GO:0051539
;
4 iron, 4 sulfur cluster binding ( rnfC )
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PID
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1787916
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EC number
(KEGG Pathway)
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
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RNFC_ECOLI
(
P77611
)
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- Protein name
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Electron transport complex protein rnfC.
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- Synonyms
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- Gene name
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Name=rnfC; OrderedLocusNames=b1629;
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| Sequences |
Amino acid
FASTA format
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0001 MLKLFSAFRK NKIWDFNGGI HPPEMKTQSN GTPLRQVPLA QRFVIPLKQH IGAEGELCVS VGDKVLRGQP
0071 LTRGRGKMLP VHAPTSGTVT AIAPHSTAHP SALAELSVII DADGEDCWIP RDGWADYRTR SREELIERIH
0141 QFGVAGLGGA GFPTGVKLQG GGDKIETLII NAAECEPYIT ADDRLMQDCA AQVVEGIRIL AHILQPREIL
0211 IGIEDNKPQA ISMLRAVLAD SNDISLRVIP TKYPSGGAKQ LTYILTGKQV PHGGRSSDIG VLMQNVGTAY
0281 AVKRAVIDGE PITERVVTLT GEAIARPGNV WARLGTPVRH LLNDAGFCPS ADQMVIMGGP LMGFTLPWLD
0351 VPVVKITNCL LAPSANELGE PQEEQSCIRC SACADACPAD LLPQQLYWFS KGQQHDKATT HNIADCIECG
0421 ACAWVCPSNI PLVQYFRQEK AEIAAIRQEE KRAAEAKARF EARQARLERE KAARLERHKS AAVQPAAKDK
0491 DAIAAALARV KEKQAQATQP IVIKAGERPD NSAIIAAREA RKAQARAKQA ELQQTNDAAT VADPRKTAVE
0561 AAIARAKARK LEQQQANAEP EQQVDPRKAA VEAAIARAKA RKLEQQQANA EPEEQVDPRK AAVEAAIARA
0631 KARKLEQQQA NAEPEQQVDP RKAAVEAAIA RAKARKREQQ PANAEPEEQV DPRKAAVEAA IARAKARKLE
0701 QQQANAVPEE QVDPRKAAVA AAIARAQAKK AAQQKVVNED
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Nucleotide
FASTA format
View sequence out neighbor 100bp
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-100 CCGACGCACT GCATCTCGTT GCAACCGGTC
-070 GCAGAAACAC CTGACTCCTG GAAATGGGAT CTGAACACCA TTCCCGTGCG TATCATTCCC GTGGAACACC
0001 atgcttaagt tattctctgc attcagaaaa aataaaatct gggatttcaa cggcggcatc catccaccgg
0071 agatgaaaac ccagtccaac ggtacacccc tgcgccaggt acccctggcg cagcgttttg ttattccact
0141 gaaacagcat attggcgctg aaggtgagtt gtgcgttagc gtcggcgata aagtattgcg cggccagccg
0211 cttacccgtg gtcgcggcaa aatgctgcct gttcacgcgc ccacctcggg taccgttacg gctattgcgc
0281 cccactctac ggctcatcct tcagctttag ctgaattaag cgtgattatt gatgccgatg gtgaagactg
0351 ctggatcccg cgcgacggct gggccgatta tcgcactcgc agtcgcgaag agttaatcga gcgcatacat
0421 cagtttggtg ttgccgggct gggcggtgca ggattcccga caggcgttaa attgcagggt ggcggagata
0491 agattgaaac gttgattatc aacgcggctg agtgcgagcc gtacattacc gccgatgacc gtttgatgca
0561 ggattgcgcg gctcaggtcg tagagggtat tcgcattctt gcgcatattc tgcagccacg cgaaattctt
0631 atcggcattg aagataacaa accgcaggcg atttccatgc tgcgcgcggt gctggcggac tctaacgata
0701 tttctctgcg ggtgattcca accaaatatc cttctggcgg tgctaaacaa ttaacctaca ttctgaccgg
0771 gaagcaggtt ccacatggcg ggcgttcatc cgatatcggc gtattaatgc aaaacgtcgg cactgcttat
0841 gcagtgaaac gtgccgttat tgatggcgag ccgattaccg agcgtgttgt aaccctgact ggcgaagcaa
0911 tcgctcgccc gggcaacgtc tgggcacggc tggggacgcc agtgcgtcat ttattgaatg atgccggatt
0981 ctgcccctct gccgatcaaa tggtgattat gggtggcccg ctaatgggct ttaccttgcc atggctggat
1051 gtcccggtcg taaagattac caactgtctg ttggctccct ctgccaatga acttggcgaa ccacaggaag
1121 aacaaagctg catccggtgt agcgcctgtg ctgacgcctg ccctgcggat cttttgccgc aacagttgta
1191 ctggttcagc aaaggtcagc aacacgataa agctaccacg cataacattg ctgattgcat tgaatgtggg
1261 gcttgcgcgt gggtttgccc gagcaatatt cccctggtgc aatatttccg tcaggaaaaa gctgaaattg
1331 cggctattcg tcaggaagaa aagcgcgccg cagaagccaa agcgcgtttc gaagcgcgcc aggctcgtct
1401 ggagcgcgaa aaagcggctc gccttgaacg acataagagc gcagccgttc aacctgcagc caaagataaa
1471 gatgcgattg ctgccgctct ggcgcgggtg aaagagaaac aggcccaggc tacacagcct attgtgatta
1541 aagcgggcga acgcccggat aacagtgcaa ttattgcagc acgggaagcc cgtaaagcgc aagccagagc
1611 gaaacaggca gaactgcagc aaactaacga cgcagcaacc gttgctgatc cacgtaaaac tgccgttgaa
1681 gcagctatcg cccgcgccaa agcgcgcaag ctggaacagc aacaggctaa tgcggaacca gaacaacagg
1751 tcgatccgcg caaagccgcc gtcgaagccg ctattgcccg tgccaaagcg cgcaagctgg aacagcaaca
1821 ggctaatgcg gaaccagaag aacaggtcga tccgcgcaaa gccgccgtcg aagccgctat tgcccgtgcc
1891 aaagcacgca agctggaaca gcaacaggct aatgccgagc cagaacaaca ggtcgatccg cgcaaagccg
1961 ccgtcgaagc cgctattgcc cgagccaaag cgcgcaaacg ggaacagcaa ccggctaatg cggagccaga
2031 agaacaggtt gatccgcgca aagctgccgt cgaagcggct attgcacgcg ccaaagcacg caagctggaa
2101 cagcaacagg ctaatgcggt accagaagaa caggttgatc cgcgcaaagc ggcagttgcc gcggctattg
2171 cccgcgctca ggccaaaaaa gccgcccagc agaaggttgt aaacgaggac taaATGGTAT TCAGAATAGC
2241 TAGCTCCCCT TATACCCATA ACCAGCGCCA GACATCGCGC ATTATGCTGT TGGTGTTGCT CGCAGCCGTG
2311 CCAGGAATCG CAG
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