MG1655
W3110
Search for
Japanese | English
Gene Report : rsxB
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)  
     Deletion DE(PLK1608)  ,  OCL90-3 (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  rsxB
Related strains
     Strains Search Search strains by gene name:  rsxB   Search strains by all related name:  rsxB b1628 ECK1624 JW1620 o192 o192a rnfB ydgM

General information  (Go to Linear View:)
 Gene Name rsxB  
 Alternative name b1628,ECK1624,JW1620,o192,o192a,rnfB,ydgM  
 Location, Length 1,704,372 - 1,704,950 (  +  ) ;   36.73 min ; 579 (bp) ,   192 (aa) Go to Linear View
 Product electron transport complex protein, iron-sulfur protein, required for the reduction of SoxR  
 Operon Name ydgK-rsxABCDGE-nth  
 Note GO_function: GO:0009055 - electron carrier activity  
 Function  
 Gene Ontology GO:0005506 ; iron ion binding ( rnfB )
GO:0005737 ; cytoplasm ( rnfB )
GO:0005886 ; plasma membrane ( rnfB )
GO:0006118 ; electron transport ( rnfB )
GO:0006810 ; transport ( rnfB )
GO:0009055 ; electron carrier activity ( rnfB )
GO:0016020 ; membrane ( rnfB )
GO:0046872 ; metal ion binding ( rnfB )
GO:0051536 ; iron-sulfur cluster binding ( rnfB )
GO:0051537 ; 2 iron, 2 sulfur cluster binding ( rnfB )
GO:0051539 ; 4 iron, 4 sulfur cluster binding ( rnfB )
 PID 1787915  
 EC number
  (KEGG Pathway)
 
 
SWISS-PROT  ( Show details )
  botton Entry name(Acc.no) RNFB_ECOLI ( P77223 )
    -  Protein name Electron transport complex protein rnfB.  
    -  Synonyms  
    -  Gene name Name=rnfB; OrderedLocusNames=b1628;  

 Linear View (Whole Mode)
View Location
   1695.0  –  1720.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP rsxB (  homologous genes of other bacterias  )  
    PDB     (database updated : 2007.02.20 )
         PSI-BLAST Chain B, Ethylbenzene Dehydrogenase From Aromatoleum Aromaticum  
    SWISS-PROT     (database updated : 2007.02.20 )
         BLAST Electron transport complex protein rnfB  
         PSI-BLAST Electron transport complex protein rnfB
    nr     (database updated : 2007.02.20 )
         BLAST electron transport complex protein RnfB [Escherichia coli K12]  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE PKC_PHOSPHO_SITE    MYRISTYL    4FE4S_FERREDOXIN     

Other Cross-Reference
    COG COG2878C 
    EcoCyc rsxB 

Sequences
Amino acid
FASTA format
0001 MNAIWIAVAA VSLLGLAFGA ILGYASRRFA VEDDPVVEKI DEILPQSQCG QCGYPGCRPY AEAISCNGEK 
0071 INRCAPGGEA VMLKIAELLN VEPQPLDGEA QEITPARMVA VIDENNCIGC TKCIQACPVD AIVGATRAMH 
0141 TVMSDLCTGC NLCVDPCPTH CISLQPVAET PDSWKWDLNT IPVRIIPVEH HA

Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             CTGATGTCCC GGCACCTTTT CGCGGTAATG 
-070 CCATTGCGTT AATTACCGCA GGTCTTATGT CTCTGGCCTT TATGGGCTTT AGTGGTTTGG TGAAGTTGTA 
0001 atgaatgcta tctggattgc cgttgccgcc gtgagcctgc tgggcctggc gtttggcgcc attctgggtt 
0071 atgcctcccg ccgttttgcg gtggaagacg atccggtcgt tgagaaaatt gacgaaatct taccgcagag 
0141 ccagtgtggt cagtgcggtt atcccggctg tcgcccctac gcggaagcca tcagctgtaa cggtgaaaaa 
0211 atcaaccgtt gcgccccagg tggcgaagct gtgatgctaa aaattgccga gttgcttaat gtcgagccgc 
0281 agccgctgga tggcgaagcg caagagataa cgcctgcgcg gatggtggcg gttattgatg aaaataactg 
0351 tattggctgc actaaatgta ttcaggcgtg tccggtagac gccatcgttg gcgctacccg tgccatgcat 
0421 acggtaatga gtgatctctg tacgggctgc aatttatgtg ttgatccgtg cccgacgcac tgcatctcgt 
0491 tgcaaccggt cgcagaaaca cctgactcct ggaaatggga tctgaacacc attcccgtgc gtatcattcc 
0561 cgtggaacac catgcttaaG TTATTCTCTG CATTCAGAAA AAATAAAATC TGGGATTTCA ACGGCGGCAT 
0631 CCATCCACCG GAGATGAAAA CCCAGTCCAA CGGTACACCC CTGCGCCAG