|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCR33-11
(D)
,
OCR33-16
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
btuF
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
btuF
Search strains by all related name:
btuF b0158 ECK0157 JW0154 yadT
|
General information (Go to Linear View: )
|
|
Gene Name
|
btuF
|
|
Alternative name
|
b0158,ECK0157,JW0154,yadT
|
|
Location, Length
|
177,662 - 178,462
(
-
)
;
3.83
min
;
801
(bp) ,
266
(aa)
|
|
Product
|
vitamin B12 transporter subunit: periplasmic-binding component of ABC superfamily
|
|
Operon Name
|
mtn-btuF-yadS
|
|
Note
|
GO_component: GO:0042597 - periplasmic space
|
|
Function
|
|
|
Gene Ontology
|
GO:0005381
;
iron ion transmembrane transporter activity ( btuF )
GO:0006810
;
transport ( btuF )
GO:0006827
;
high-affinity iron ion transport ( btuF )
GO:0015889
;
cobalamin transport ( btuF )
GO:0042597
;
periplasmic space ( btuF )
|
|
PID
|
1786353
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
BTUF_ECOLI
(
P37028
;
P77436
)
|
|
- Protein name
|
Vitamin B12 transport protein btuF precursor.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=btuF; OrderedLocusNames=b0158;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
btuF
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, 2.0 Angstrom Structure Of Btuf, The Vitamin B12 Binding Protein Of E. Coli
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Vitamin B12-binding protein precursor
|
|
PSI-BLAST
|
Vitamin B12-binding protein precursor
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
vitamin B12-transporter protein BtuF [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
PROKAR_LIPOPROTEIN
|
| Sequences |
Amino acid
FASTA format
|
0001 MAKSLFRALV ALSFLAPLWL NAAPRVITLS PANTELAFAA GITPVGVSSY SDYPPQAQKI EQVSTWQGMN
0071 LERIVALKPD LVIAWRGGNA ERQVDQLASL GIKVMWVDAT SIEQIANALR QLAPWSPQPD KAEQAAQSLL
0141 DQYAQLKAQY ADKPKKRVFL QFGINPPFTS GKESIQNQVL EVCGGENIFK DSRVPWPQVS REQVLARSPQ
0211 AIVITGGPDQ IPKIKQYWGE QLKIPVIPLT SDWFERASPR IILAAQQLCN ALSQVD
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 gtggccgatc aacagtctca tcttagcttc
-070 gatgagttcc tggctgttgc cgctaaacag tccagcctga tggttgagtc actggtgcag aaacttgcac
0001 atggctaagt cactgttcag ggcgctggtc gccctgtctt ttcttgcgcc actgtggctc aacgccgcgc
0071 cgcgcgtcat cacgctttct cccgccaaca ctgaacttgc ctttgccgcc gggatcacgc cggttggggt
0141 cagcagctat tccgactatc ctccacaagc gcaaaagatt gagcaggttt ccacctggca ggggatgaat
0211 ctggaacgca ttgtcgcgct gaaacccgat ctggtgattg cctggcgtgg aggtaatgcc gagcggcagg
0281 ttgaccagct ggcttcgctg ggaataaaag tgatgtgggt cgatgcgaca agcattgaac aaattgccaa
0351 tgcgttacgt caactggccc cctggagtcc gcaaccagac aaggccgaac aagccgcgca atccctgctg
0421 gatcagtacg cgcaattgaa agcgcaatat gctgataaac ctaaaaaacg tgtttttctg caattcggca
0491 ttaatccgcc atttaccagt ggaaaagagt cgattcagaa ccaggtactc gaagtttgtg gcggagaaaa
0561 catctttaaa gacagccggg ttccctggcc gcaagttagc cgcgaacagg tgttagcacg ctcgccacag
0631 gcgattgtca ttacaggcgg accggaccaa attcctaaaa tcaaacaata ctggggtgaa cagctcaaaa
0701 ttcccgttat tcctctcacg agtgactggt ttgaacgtgc aagcccacgt attatcctcg ctgcacaaca
0771 gctctgtaat gcgctttcac aggtagatta gcgcctgacc ttttcaggtg ctcagtgggg attgaacaat
0841 gctcgtctat tggctggata tagtcggcac agcggtattt gccatctccg gcgttttgtt a
|
