|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCR33-11
(D)
,
OCR33-16
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yadS
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yadS
Search strains by all related name:
yadS b0157 ECK0156 JW0153
|
General information (Go to Linear View: )
|
|
Gene Name
|
yadS
|
|
Alternative name
|
b0157,ECK0156,JW0153
|
|
Location, Length
|
177,001 - 177,624
(
-
)
;
3.81
min
;
624
(bp) ,
207
(aa)
|
|
Product
|
inner membrane protein, UPF0126 family
|
|
Operon Name
|
mtn-btuF-yadS
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
GO:0005886
;
plasma membrane ( yadS )
GO:0016020
;
membrane ( yadS )
GO:0016021
;
integral to membrane ( yadS )
|
|
PID
|
1786352
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
YADS_ECOLI
(
P37027
)
|
|
- Protein name
|
Hypothetical UPF0126 protein yadS.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yadS; OrderedLocusNames=b0157, c0193;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yadS
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
UPF0126 inner membrane protein yadS
|
|
PSI-BLAST
|
UPF0126 membrane protein HI1240
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
conserved inner membrane protein [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MLVYWLDIVG TAVFAISGVL LAGKLRMDPF GVLVLGVVTA VGGGTIRDMA LDHGPVFWVK DPTDLVVAMV
0071 TSMLTIVLVR QPRRLPKWML PVLDAVGLAV FVGIGVNKAF NAEAGPLIAV CMGVITGVGG GIIRDVLARE
0141 IPMILRTEIY ATACIIGGIV HATAYYTFSV PLETASMMGM VVTLLIRLAA IRWHLKLPTF ALDENGR
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 gcaagcccac gtattatcct cgctgcacaa
-070 cagctctgta atgcgctttc acaggtagat tagcgcctga ccttttcagg tgctcagtgg ggattgaaca
0001 atgctcgtct attggctgga tatagtcggc acagcggtat ttgccatctc cggcgttttg ttagccggaa
0071 aattgcgtat ggaccctttt ggtgttctgg tactgggcgt ggtaaccgca gtaggcggcg ggacaattcg
0141 cgacatggcg ctggatcacg gcccggtatt ttgggtgaaa gatcccaccg atctggtcgt tgcaatggtc
0211 accagcatgc tgaccatcgt gctggtgcgc cagccaagac gcttaccaaa atggatgttg ccggtgctgg
0281 acgccgttgg tctggcggtg tttgtcggca ttggcgtgaa taaagccttt aatgcggaag ccggtccgtt
0351 aatcgcggtt tgtatgggcg tcattactgg cgttggcggc gggatcattc gtgatgttct ggcccgcgaa
0421 atccccatga ttttacgtac agaaatctac gcaactgcct gtattatcgg cggtattgtc cacgctacgg
0491 cttattacac attttccgta ccactggaaa cagccagtat gatgggcatg gtcgtgacgc tattgattcg
0561 gctggcggct attcgttggc atcttaagct accgacgttt gcgctggatg agaatgggcg ttgaagagag
0631 aagatgtgcc ggatagttta tccggcacat gaacaacaga ttagatacta aaggaagaac cgcaaccgca
0701 ggtgcttttc gcgttcgggt tggt
|
