|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
|
|
|
Deletion
|
20
(LD)
,
DE(PLK1608)
,
OCR70,L90-6 (LD 20-1_P/O & 20-2TC)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
relE
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
relE
Search strains by all related name:
relE b1563 ECK1557 JW1555
|
General information (Go to Linear View: )
|
|
Gene Name
|
relE
|
|
Alternative name
|
b1563,ECK1557,JW1555
|
|
Location, Length
|
1,643,370 - 1,643,657
(
-
)
;
35.42
min
;
288
(bp) ,
95
(aa)
|
|
Product
|
Qin prophage; toxin of the RelE-RelB toxin-antitoxin system
|
|
Operon Name
|
relBE-hokD
|
|
Note
|
GO_component: GO:0005737 - cytoplasm; GO_function: GO:0016564 - transcription repressor activity; GO_process: GO:0006350 - transcription
|
|
Function
|
Phage or Prophage Related
|
|
Gene Ontology
|
GO:0006350
;
transcription ( relE )
GO:0006355
;
regulation of transcription, DNA-dependent ( relE )
GO:0006950
;
response to stress ( relE )
GO:0009405
;
pathogenesis ( relE )
|
|
PID
|
1787846
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
RELE_ECOLI
(
P07008
)
|
|
- Protein name
|
Hypothetical relE protein.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=relE; OrderedLocusNames=b1563, SF1548, S1669;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
relE
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Structure Of Phosphoserine Aminotransferase From Escherichia Coli
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Toxin relE
|
|
PSI-BLAST
|
Hypothetical relE-like protein
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
Qin prophage; toxin of the RelE-RelB toxin-antitoxin system [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
AMIDATION
|
|
MMBR References
|
EMBO J. 1986;5:2023-2029
Mechanism of postreplicational killing by the hok gene product of the parB system of plasmid R1 and its homology with the relF gene product of the E. coli relB operon.
Gerdes, K., F. W. Bech, S. T. Jorgensen, A. Lobner-Olesen, P. B. Rasmussen, T. Atlung, L. Boe, H. O. Karlstrom, S. Molin, and K. von Meyenberg.
|
EMBO J. 1985;4:1059-1066
Sequence of the relB transcription unit from Escherichia coli and identification of the relB gene.
Bech, F. W., S. T. Jorgensen, and B. Diderichsen.
|
| Sequences |
Amino acid
FASTA format
|
0001 MAYFLDFDER ALKEWRKLGS TVREQLKKKL VEVLESPRIE ANKLRGMPDC YKIKLRSSGY RLVYQVIDEK
0071 VVVFVISVGK RERSEVYSEA VKRIL
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 aacagacact cctgagtgat gaagatgctg
-070 aacttgtgga gatagtgaaa gaacggcttc gtaatcctaa gccagtacgt gtgacgctgg atgaactctg
0001 atggcgtatt ttctggattt tgacgagcgg gcactaaagg aatggcgaaa gctgggctcg acggtacgtg
0071 aacagttgaa aaagaagctg gttgaagtac ttgagtcacc ccggattgaa gcaaacaagc tccgtggtat
0141 gcctgattgt tacaagatta agctccggtc ttcaggctat cgccttgtat accaggttat agacgagaaa
0211 gttgtcgttt tcgtgatttc tgttgggaaa agagaacgct cggaagtata tagcgaggcg gtcaaacgca
0281 ttctctgaac caaagcatga catctctgtt tcgcaccgaa ggtgacactt ctgctttgcg ttgacaggag
0351 aagcaggcta tgaagcagca aaaggcgatg ttaatcgc
|
