MG1655
W3110
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Gene Report : yddA
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)  
     Deletion 20 (LD)  ,  DE(PLK1608)  ,  OCR70,L90-5 (LD 20-1_P/O) (D)  ,  OCR70,L90-6 (LD 20-1_P/O & 20-2TC) (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  yddA
Related strains
     Strains Search Search strains by gene name:  yddA   Search strains by all related name:  yddA b1496 ECK1490 JW5242

General information  (Go to Linear View:)
 Gene Name yddA  
 Alternative name b1496,ECK1490,JW5242  
 Location, Length 1,575,681 - 1,577,366 (  -  ) ;   33.96 min ; 1686 (bp) ,   561 (aa) Go to Linear View
 Product fused predicted multidrug transporter subunitsof ABC superfamily: membrane component/ATP-binding component  
 Operon Name yddAB  
 Note GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0019866 - organelle inner membrane  
 Function putative transport; Not classified  
 Gene Ontology GO:0000166 ; nucleotide binding ( yddA )
GO:0005524 ; ATP binding ( yddA )
GO:0005886 ; plasma membrane ( yddA )
GO:0006810 ; transport ( yddA )
GO:0016020 ; membrane ( yddA )
GO:0016021 ; integral to membrane ( yddA )
GO:0016887 ; ATPase activity ( yddA )
GO:0017111 ; nucleoside-triphosphatase activity ( yddA )
GO:0042626 ; ATPase activity, coupled to transmembrane movement of substances ( yddA )
 PID 1787772  
 EC number
  (KEGG Pathway)   		 
SWISS-PROT  ( Show details [ 3 more] )
  botton Entry name(Acc.no) YDDA_ECOLI ( P31826 ; P76133; P76876 )
    -  Protein name Hypothetical ABC transporter ATP-binding protein yddA  
    -  Synonyms CDS102  
    -  Gene name Name=yddA; OrderedLocusNames=b1496;  

 Linear View (Whole Mode)
View Location
   1565.0  –  1590.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP yddA (  homologous genes of other bacterias  )  
    PDB     (database updated : 2007.02.20 )
         PSI-BLAST Chain A, Multidrug Abc Transporter Sav1866  
    SWISS-PROT     (database updated : 2007.02.20 )
         BLAST Inner membrane ABC transporter ATP-binding protein yddA  
         PSI-BLAST Lipid A export ATP-binding/permease protein msbA
    nr     (database updated : 2007.02.20 )
         BLAST fused predicted multidrug transporter subunits of ABC superfamily: membrane component/ATP-binding component [Escherichia coli K12]  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE ASN_GLYCOSYLATION    GLYCOSAMINOGLYCAN    PKC_PHOSPHO_SITE    CK2_PHOSPHO_SITE    TYR_PHOSPHO_SITE    MYRISTYL    AMIDATION    ATP_GTP_A    ABC_TRANSPORTER     

Other Cross-Reference
    COG COG4178R 
    EcoCyc yddA 

Sequences
Amino acid
FASTA format 
0001 MITIPITLRM LIAKYLCLLK PFWLRKNNKT SVLLIIIILA MILGVVKIQV WLNDWNNDFF NALSQKETDK 
0071 LWQLVLWFPA LLGIFVLISV NKTWLIKLLT IRWREWLTDY YLNRWFADKN YYFTQIYGEH KNTDNPDQRI 
0141 AEDILLLISK TLSLSFGFIQ SLSMLITFTV ILWESAGTLS FTVGGTEWNI QGYMVYTVVL IVIGGTLFTH 
0211 KVGKRIRPLN VEKQRSEATF RTNLVQHNKQ AELIALSNAE SLQRQELSDN FHTIKENWHR LMNRQRWLDY 
0281 WQNIYSRSLS VLPYFLLLPQ FISGQINLGG LMKSRQAFML VSNNLSWFIY KYDELAELAA VIDRLYEFHQ 
0351 LTEQRPTNKP KNCQHAVQVA DASIRTPDNK IILENLNFHV SPGKWLLLKG YSGAGKTTLL KTLSHCWPWF 
0421 KGDISSPADS WYVSQTPLIK TGLLKEIICK ALPLPVDDKS LSEVLHQVGL GKLAARIHDH DRWGDILSSG 
0491 EKQRIALARL ILRRPKWIFL DETTSHLEEQ EAIRLLRLVR EKLPTSGVIM VTHQPGVWNL ADDICDISAV 
0561 L
Nucleotide
FASTA format

View sequence out neighbor 100bp 
-100                                             tattccttta tatttcatat tgttaaatga 
-070 tacttaaata aatttcatca gtaaatcatt gccatagata atcattggat ggcacaatca attttcgcta 
0001 atgataacca ttcccattac gcttcgtatg ttgatagcaa agtatctctg tctgttgaag cccttttggc 
0071 tgcgtaagaa taataaaact tcagtgttgt taatcattat tatcctcgcc atgatccttg gcgtggttaa 
0141 aattcaggtc tggttaaacg actggaataa tgattttttc aatgcgctaa gccagaaaga aaccgataag 
0211 ctttggcagc ttgtcctttg gttccctgcc ctgctgggga tctttgtatt aatatccgta aacaaaacat 
0281 ggttaattaa actactgact attcgctggc gcgaatggtt aacagattac taccttaatc ggtggtttgc 
0351 agataaaaac tactacttca cgcagatcta cggcgagcat aaaaatacag ataaccctga ccaacgtatc 
0421 gctgaagaca ttctcttact gatcagcaaa acgctcagtc tttcatttgg cttcatccag tcacttagca 
0491 tgctgatcac ctttaccgtt attctttggg aaagcgcggg tacgctctca ttcactgttg gtggaacaga 
0561 atggaatatc caggggtata tggtctatac cgtcgtgctc attgtgatcg gtggaacttt atttacccat 
0631 aaggtgggta aacgtattcg tccgcttaat gtggaaaaac aacgtagcga agcgacattt cgaacaaatc 
0701 ttgtgcagca taataagcag gcagaactga ttgcgctaag caatgctgag tctctacaac gccaggagtt 
0771 gagcgacaat tttcatacca ttaaagagaa ctggcatcgt ttaatgaatc gtcagcggtg gcttgattac 
0841 tggcagaata tttattcgcg ctcgcttagc gttcttccct actttctgtt attgccgcag tttattagcg 
0911 ggcagatcaa tctgggcgga ctgatgaaat cgcgccaggc atttatgctg gtatcgaaca atttaagctg 
0981 gtttatttat aaatatgacg aacttgctga actggctgcg gttatcgatc gcttgtatga gttccatcaa 
1051 ctcactgaac agcgccctac gaataagcct aaaaattgcc aacatgcggt acaagtggct gatgcgagta 
1121 ttcgtacgcc tgataataag atcatattag agaacctgaa ctttcatgtt tcgccaggca aatggctatt 
1191 actgaaaggc tactctggcg cgggaaaaac cacactgctt aaaacattat cccactgctg gccgtggttt 
1261 aaaggtgata tttcttctcc tgctgacagt tggtatgtgt cacaaacacc gttaatcaaa accggcttac 
1331 tgaaagagat tatttgtaaa gcacttcccc tgcccgtaga cgataaatcg ttgagcgaag tactgcatca 
1401 ggttggtctt gggaaattgg ctgcgcgtat tcatgaccac gatcgctggg gagatattct ttccagcggc 
1471 gaaaaacaac gtatcgccct ggcacgatta attttacgac gtccgaaatg gatatttctt gacgaaacta 
1541 cctctcatct tgaggaacaa gaggctatcc gcttactgcg tttagtgcgt gaaaaactac ccacaagcgg 
1611 cgtcattatg gttacacatc aacccggtgt ctggaacctg gccgatgata tttgtgacat tagcgcggtt 
1681 ttataaaaac aataaaagcc ctgctgtacg gagatataaa taaatgaagc gagttcttat tcctggcgtc 
1751 attttatgtg gcgctgatgt ggcgcaggcc gtcgat