|
PEC Original Annotations
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|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCR32
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yadD
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yadD
Search strains by all related name:
yadD b0132 ECK0131 JW5010
|
General information (Go to Linear View: )
|
|
Gene Name
|
yadD
|
|
Alternative name
|
b0132,ECK0131,JW5010
|
|
Location, Length
|
146,968 - 147,870
(
+
)
;
3.17
min
;
903
(bp) ,
300
(aa)
|
|
Product
|
putative transposase
|
|
Operon Name
|
yadD
|
|
Note
|
|
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Function
|
|
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Gene Ontology
|
|
|
PID
|
1786324
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YADD_ECOLI
(
P31665
;
P75660; Q8KJQ2
)
|
|
- Protein name
|
Hypothetical protein yadD.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yadD; OrderedLocusNames=b0132;
|
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yadD
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein yadD
|
|
PSI-BLAST
|
Hypothetical protein yadD
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
predicted transposase [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MDAPSTTPHD AVFKQFLMHA ETARDFLEIH LPVELRELCD LNTLHLESGS FIEESLKGHS TDVLYSVQMQ
0071 GNPGYLHVVI EHQSKPDKKM AFRMMRYSIA AMHRHLEADH DKLPLVVPIL FYQGEATPYP LSMCWFDMFY
0141 SPELARRVYN SPFPLVDITI TPDDEIMQHR RIAILELLQK HIRQRDLMLL LEQLVTLIDE GYTSGSQLVA
0211 MQNYMLQRGH TEQADLFYGV LRDRETGGES MMTLAQWFEE KGIEKGIQQG RQEVSQEFAQ RLLSKGMSRE
0281 DVAEMANLPL AEIDKVINLI
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TTCTCTGAAC GCTGCTCGGT AAACAATAAA
-070 GAGGTGGCTG ACGATAGCGC GCCTTGACTG GATACTGCCT TCACGCAAAG CCACACGGAA GACAGGGAAG
0001 atggatgcac cgagtaccac accgcatgac gcggtattta aacaattttt aatgcatgcg gagacggctc
0071 gcgactttct ggagatacat ttgccagtgg aattacgcga actttgtgac ctcaacacgc ttcatttaga
0141 gtcggggagt ttcattgaag agagcctgaa aggacacagc acggacgtgc tctattccgt gcaaatgcag
0211 ggcaatcccg gttatctgca tgttgtgatt gaacaccaaa gcaagccgga taagaaaatg gcctttcgca
0281 tgatgcgtta ttctatagcc gccatgcacc ggcatctgga ggctgaccac gataagctgc cgctggtggt
0351 gccgatactg ttttatcagg gcgaggccac accttatccg ctatcaatgt gctggtttga tatgttttac
0421 tcgccggagc tggcgcgacg cgtctataac agtcctttcc cgctggtgga tatcaccatc acaccggatg
0491 acgaaatcat gcaacatcgg cggattgcga ttctcgaact actgcaaaaa catattcgcc agcgcgactt
0561 aatgttattg cttgagcaac tggtcacgct gatcgacgaa gggtacacta gcggaagtca gttagttgcc
0631 atgcaaaact atatgctgca acgcggtcat actgaacaag cggatttgtt ttacggtgtg ttgagagaca
0701 gggaaacggg aggggagtct atgatgacgc tggcgcagtg gtttgaagag aaagggattg agaaggggat
0771 tcagcaggga agacaggaag taagtcagga attcgcccag cgtcttctga gtaaaggaat gtctcgggaa
0841 gacgttgcag agatggcaaa tttacctctt gctgagattg ataaggtaat taaccttatt taaGTTACCT
0911 GTGTTATGAC AGATGACGTG GGGTAAATTA ATAACTGGCG CCATCAGCCG TAGCGCCAGT TAAGTATTAC
0981 GCCAGCTCGA CCATTTTGTT GTC
|
