|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
20
(LD)
,
DE(PLK1608)
,
OCR70,L90-5 (LD 20-1_P/O)
(D)
,
OCR70,L90-6 (LD 20-1_P/O & 20-2TC)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
racC
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
racC
Search strains by all related name:
racC b1351 ECK1348 JW1345 sbcA
|
General information (Go to Linear View: )
|
|
Gene Name
|
racC
|
|
Alternative name
|
b1351,ECK1348,JW1345,sbcA
|
|
Location, Length
|
1,415,512 - 1,415,787
(
-
)
;
30.51
min
;
276
(bp) ,
91
(aa)
|
|
Product
|
Rac prophage; putative protein
|
|
Operon Name
|
racC
|
|
Note
|
RacC protein
|
|
Function
|
membrane; Phage or Prophage Related
|
|
Gene Ontology
|
|
|
PID
|
1787614
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
RACC_ECOLI
(
P15033
)
|
|
- Protein name
|
RacC protein.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=racC; OrderedLocusNames=b1351;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
racC
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Protein racC
|
|
PSI-BLAST
|
Protein racC
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
Rac prophage; predicted protein [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
CK2_PHOSPHO_SITE
MYRISTYL
AMIDATION
|
|
MMBR References
|
J Bacteriol. 1989;171(4):2101-9.
Suppression of a frameshift mutation in the recE gene of Escherichia coli K-12 occurs by gene fusion.
Chu CC, Templin A, Clark AJ.
(
2649487
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MITNYEATVV TTDDIVHEVN LEGKRIGYVI KTENKETPFT VVDIDGPSGN VKTLDEGVKK MCLVHIGKNL
0071 PAEKKAEFLA TLIAMKLKGE I
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 aagaccagat ggcacatgaa ctttaattaa
-070 ttgactattc gaaactgaat ttatgccaga aatggcaggt attcgctcaa ccttaattaa ggagaaaaac
0001 atgattacca attatgaagc cactgttgta actaccgatg acattgttca cgaggtgaat ctggaaggaa
0071 agcgcattgg ctacgtaatt aaaacagaaa ataaagaaac cccattcact gtggttgata tcgatggtcc
0141 atcaggcaac gtaaaaacac ttgatgaagg tgtcaaaaaa atgtgcctgg tgcatatcgg aaagaatctg
0211 cccgcagaaa aaaaagccga atttctggca actctaattg caatgaaatt aaaaggtgaa atctgaaaga
0281 aatagcctgc gtatggcgca ggctatgaac agtgtgtatc cggcaagatc attcactgaa caaaacgaat
0351 tttaatctga gttgaggtta aaaaac
|
