MG1655
W3110
Search for
Japanese | English
Gene Report : racC
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)  
     Deletion 20 (LD)  ,  DE(PLK1608)  ,  OCR70,L90-5 (LD 20-1_P/O) (D)  ,  OCR70,L90-6 (LD 20-1_P/O & 20-2TC) (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  racC
Related strains
     Strains Search Search strains by gene name:  racC   Search strains by all related name:  racC b1351 ECK1348 JW1345 sbcA

General information  (Go to Linear View:)
 Gene Name racC  
 Alternative name b1351,ECK1348,JW1345,sbcA  
 Location, Length 1,415,512 - 1,415,787 (  -  ) ;   30.51 min ; 276 (bp) ,   91 (aa) Go to Linear View
 Product Rac prophage; putative protein  
 Operon Name racC  
 Note RacC protein  
 Function membrane; Phage or Prophage Related  
 Gene Ontology  
 PID 1787614  
 EC number
  (KEGG Pathway)
 
 
SWISS-PROT  ( Show details [ 2 more] )
  botton Entry name(Acc.no) RACC_ECOLI ( P15033 )
    -  Protein name RacC protein.  
    -  Synonyms  
    -  Gene name Name=racC; OrderedLocusNames=b1351;  

 Linear View (Whole Mode)
View Location
   1405.0  –  1430.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP racC (  homologous genes of other bacterias  )  
    PDB     (database updated : 2007.02.20 )
        PSI-BLAST  
    SWISS-PROT     (database updated : 2007.02.20 )
         BLAST Protein racC  
         PSI-BLAST Protein racC
    nr     (database updated : 2007.02.20 )
         BLAST Rac prophage; predicted protein [Escherichia coli K12]  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE CK2_PHOSPHO_SITE    MYRISTYL    AMIDATION     

Other Cross-Reference
    EcoCyc racC 

MMBR References
J Bacteriol. 1989;171(4):2101-9.
Suppression of a frameshift mutation in the recE gene of Escherichia coli K-12 occurs by gene fusion.
Chu CC, Templin A, Clark AJ. ( 2649487 )

Sequences
Amino acid
FASTA format
0001 MITNYEATVV TTDDIVHEVN LEGKRIGYVI KTENKETPFT VVDIDGPSGN VKTLDEGVKK MCLVHIGKNL 
0071 PAEKKAEFLA TLIAMKLKGE I

Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             aagaccagat ggcacatgaa ctttaattaa 
-070 ttgactattc gaaactgaat ttatgccaga aatggcaggt attcgctcaa ccttaattaa ggagaaaaac 
0001 atgattacca attatgaagc cactgttgta actaccgatg acattgttca cgaggtgaat ctggaaggaa 
0071 agcgcattgg ctacgtaatt aaaacagaaa ataaagaaac cccattcact gtggttgata tcgatggtcc 
0141 atcaggcaac gtaaaaacac ttgatgaagg tgtcaaaaaa atgtgcctgg tgcatatcgg aaagaatctg 
0211 cccgcagaaa aaaaagccga atttctggca actctaattg caatgaaatt aaaaggtgaa atctgaaaga 
0281 aatagcctgc gtatggcgca ggctatgaac agtgtgtatc cggcaagatc attcactgaa caaaacgaat 
0351 tttaatctga gttgaggtta aaaaac