|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
20
(LD)
,
DE(PLK1608)
,
OCR70,L90-5 (LD 20-1_P/O)
(D)
,
OCR70,L90-6 (LD 20-1_P/O & 20-2TC)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
recT
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
recT
Search strains by all related name:
recT b1349 ECK1346 JW1343
|
General information (Go to Linear View: )
|
|
Gene Name
|
recT
|
|
Alternative name
|
b1349,ECK1346,JW1343
|
|
Location, Length
|
1,412,008 - 1,412,817
(
-
)
;
30.43
min
;
810
(bp) ,
269
(aa)
|
|
Product
|
Rac prophage; recombination and repair protein
|
|
Operon Name
|
recET-lar-ydaCQ-intR
|
|
Note
|
recombinase, DNA renaturation
|
|
Function
|
enzyme; DNA - replication, repair,restriction/modification: Phage or Prophage Related
|
|
Gene Ontology
|
GO:0003677
;
DNA binding ( recT )
GO:0006259
;
DNA metabolic process ( recT )
GO:0006310
;
DNA recombination ( recT )
|
|
PID
|
1787611
|
EC number
(KEGG Pathway)
|
|
|
Verified Protein Starts
(data
compiled from literature and appropriate citations are available from EcoGene)
|
|
EcoGene
|
recT
(
EG11899
)
|
|
Number of removed
|
0 aa cleaved
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
RECT_ECOLI
(
P33228
;
P76849
)
|
|
- Protein name
|
RecT protein
|
|
- Synonyms
|
P33
|
|
- Gene name
|
Name=recT; OrderedLocusNames=b1349;
|
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
recT
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Protein recT
|
|
PSI-BLAST
|
Protein recT
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
recombinational DNA repair protein [Escherichia coli APEC O1]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
AMIDATION
|
|
MMBR References
|
J Bacteriol. 1993;175:277-287
Identification and characterization of the Escherichia coli RecT protein, a protein encoded by the recE region that promotes renaturation of homologous single-stranded DNA.
Hall, S. D., M. F. Kane, and R. D. Kolodner.
|
Mol Microbiol. 1994;11(1):23-30.
Homologous pairing proteins encoded by the Escherichia coli recE and recT genes.
Kolodner R, Hall SD, Luisi-DeLuca C.
(
8145642
)
|
Gene. 1994;138(1-2):17-25.
Involvement of RecE exonuclease and RecT annealing protein in DNA double-strand break repair by homologous recombination.
Kusano K, Takahashi NK, Yoshikura H, Kobayashi I.
(
8125297
)
|
J Bacteriol. 1993;175:7673-7682
Genetic and molecular analyses of the C-terminal region of the recE gene from the Rac prophage of Escherichia coli K-12 reveal the recT gene.
Clark, A. J., V. Sharma, S. Brenowitz, C. C. Chu, S. Sandler, L. Satin, A. Templin, I. Berger, and A. Cohen.
|
| Sequences |
Amino acid
FASTA format
|
0001 MTKQPPIAKA DLQKTQGNRA PAAVKNSDVI SFINQPSMKE QLAAALPRHM TAERMIRIAT TEIRKVPALG
0071 NCDTMSFVSA IVQCSQLGLE PGSALGHAYL LPFGNKNEKS GKKNVQLIIG YRGMIDLARR SGQIASLSAR
0141 VVREGDEFSF EFGLDEKLIH RPGENEDAPV THVYAVARLK DGGTQFEVMT RKQIELVRSL SKAGNNGPWV
0211 THWEEMAKKT AIRRLFKYLP VSIEIQRAVS MDEKEPLTID PADSSVLTGE YSVIDNSEE
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tatcaccgca atctgcgaac cctgtctgac
-070 tgcctgaata ccgatgaatg gccagctatt aagacattat cactgccccg ctgggctaag gaatatgcaa
0001 atgactaagc aaccaccaat cgcaaaagcc gatctgcaaa aaactcaggg aaaccgtgca ccagcagcag
0071 ttaaaaatag cgacgtgatt agttttatta accagccatc aatgaaagag caactggcag cagctcttcc
0141 acgccatatg acggctgaac gtatgatccg tatcgccacc acagaaattc gtaaagttcc ggcgttagga
0211 aactgtgaca ctatgagttt tgtcagtgcg atcgtacagt gttcacagct cggacttgag ccaggtagcg
0281 ccctcggtca tgcatattta ctgccttttg gtaataaaaa cgaaaagagc ggtaaaaaga acgttcagct
0351 aatcattggc tatcgcggca tgattgatct ggctcgccgt tctggtcaaa tcgccagcct gtcagcccgt
0421 gttgtccgtg aaggtgacga gtttagcttc gaatttggcc ttgatgaaaa gttaatacac cgcccgggag
0491 aaaacgaaga tgccccggtt acccacgtct atgctgtcgc aagactgaaa gacggaggta ctcagtttga
0561 agttatgacg cgcaaacaga ttgagctggt gcgcagcctg agtaaagctg gtaataacgg gccgtgggta
0631 actcactggg aagaaatggc aaagaaaacg gctattcgtc gcctgttcaa atatttgccc gtatcaattg
0701 agatccagcg tgcagtatca atggatgaaa aggaaccact gacaatcgat cctgcagatt cctctgtatt
0771 aaccggggaa tacagtgtaa tcgataattc agaggaataa ttcagcctgg cggtgtaatg caccgccaac
0841 ttgaaatatt ttttatgaga aaaattatga gatatgacaa tgttaaacca tgtccatttt gtggttgtcc
|
