MG1655
W3110
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Gene Report : rcbA
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)  
     Deletion 20 (LD)  ,  DE(PLK1608)  ,  OCR70,L90-5 (LD 20-1_P/O) (D)  ,  OCR70,L90-6 (LD 20-1_P/O & 20-2TC) (D)  
Related gene (W3110 PEC)
     Gene Search Search MG1655 PEC by gene name:  rcbA
Related strains
     Strains Search Search strains by gene name:  rcbA   Search strains by all related name:  rcbA b1347 ECK1344 f69 JW1341 ydaC

General information  (Go to Linear View:)
 Gene Name rcbA  
 Alternative name b1347,ECK1344,f69,JW1341,ydaC  
 Location, Length 1,411,555 - 1,411,764 (  -  ) ;   30.42 min ; 210 (bp) ,   69 (aa) Go to Linear View
 Product double-strand break reduction protein, Rac prophage  
 Operon Name recET-lar-ydaCQ-intR  
 Note  
 Function Phage or Prophage Related  
 Gene Ontology GO:0005515; protein binding ( ydaC )
 PID 1787609  
 EC number
  (KEGG Pathway)
 
 
SWISS-PROT  ( Show details [ 1 more] )
  botton Entry name(Acc.no) YDAC_ECOLI ( P33230 ; P77683 )
    -  Protein name Hypothetical protein ydaC.  
    -  Synonyms  
    -  Gene name Name=ydaC; OrderedLocusNames=b1347;  

 Linear View (Whole Mode)
View Location
   1400.0  –  1425.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP ydaC (  homologous genes of other bacterias  )  
    PDB     (database updated : 2007.02.20 )
        PSI-BLAST  
    SWISS-PROT     (database updated : 2007.02.20 )
         BLAST Hypothetical protein ydaC  
         PSI-BLAST Hypothetical protein ydaC
    nr     (database updated : 2007.02.20 )
         BLAST Rac prophage; predicted protein [Escherichia coli K12]  
Pfam 28.0   (database updated : 2015-05 )
    Pfam
PROSITE
    PROSITE ASN_GLYCOSYLATION    PKC_PHOSPHO_SITE    CK2_PHOSPHO_SITE    MYRISTYL    AMIDATION     

Other Cross-Reference
    EcoCyc rcbA 

Sequences
Amino acid
FASTA format
0001 MYKITATIEK EGGTPTNWTR YSKSKLTKSE CEKMLSGKKE AGVSREQKVK LINFNCEKLQ SSRIALYSN

Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             tgtaacggat gcgaatcccg aaccggttat 
-070 ggtggaagtg aaaaagaagc actcgaaaga tggaataaac gaaccactgg aaataataat ggaggtgttc 
0001 atgtataaaa ttaccgccac tattgaaaag gaaggtggca ctcctactaa ctggacaaga tattcaaaat 
0071 ctaaactaac gaaatcagaa tgcgaaaaaa tgctctcagg taaaaaagaa gcaggcgttt ccagagagca 
0141 gaaagtaaaa ctgataaatt ttaattgcga gaaacttcag tcctcgagaa ttgcattgta ttcaaattaa 
0211 aacttcatag ctgattatta ataatcaaca tcgggcgtca atttcagtct aacattggcg cctgccagag 
0281 gtgatgcgat ggcacaagta atctttaatg