|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCR69-3
(D)
,
OCR69-5
(D)
,
OCR69-7
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yciM
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yciM
Search strains by all related name:
yciM b1280 ECK1275 JW1272 o389
|
General information (Go to Linear View: )
|
|
Gene Name
|
yciM
|
|
Alternative name
|
b1280,ECK1275,JW1272,o389
|
|
Location, Length
|
1,338,582 - 1,339,751
(
+
)
;
28.85
min
;
1170
(bp) ,
389
(aa)
|
|
Product
|
TPR-repeats-containing protein
|
|
Operon Name
|
yciSM-pyrF-yciH
|
|
Note
|
putative heat shock protein
|
|
Function
|
putative factor; Not classified
|
|
Gene Ontology
|
GO:0005488
;
binding ( yciM )
GO:0008270
;
zinc ion binding ( yciM )
GO:0046872
;
metal ion binding ( yciM )
|
|
PID
|
2367116
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YCIM_ECOLI
(
P45576
;
P76836
)
|
|
- Protein name
|
Hypothetical protein yciM precursor.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yciM; OrderedLocusNames=b1280, c1749, z2526, ECs1853;
|
| Sequences |
Amino acid
FASTA format
|
0001 MLELLFLLLP VAAAYGWYMG RRSAQQNKQD EANRLSRDYV AGVNFLLSNQ QDKAVDLFLD MLKEDTGTVE
0071 AHLTLGNLFR SRGEVDRAIR IHQTLMESAS LTYEQRLLAI QQLGRDYMAA GLYDRAEDMF NQLTDETDFR
0141 IGALQQLLQI YQATSEWQKA IDVAERLVKL GKDKQRVEIA HFYCELALQH MASDDLDRAM TLLKKGAAAD
0211 KNSARVSIMM GRVFMAKGEY AKAVESLQRV ISQDRELVSE TLEMLQTCYQ QLGKTAEWAE FLQRAVEENT
0281 GADAELMLAD IIEARDGSEA AQVYITRQLQ RHPTMRVFHK LMDYHLNEAE EGRAKESLMV LRDMVGEKVR
0351 SKPRYRCQKC GFTAYTLYWH CPSCRAWSTI KPIRGLDGL
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 GCGCGCTGAA CGTAAAATAA AGCGACTGGA
-070 AAACCAGCTT TCACCCGCGA CTGACGTGGC TGTAGTGCCG CACTCGTCAG CGGCGAAGGA ATAACTTTCT
0001 atgctggagt tgttgtttct gcttttgcct gtagccgctg cctatggctg gtatatgggc cgcagaagtg
0071 cgcaacaaaa caagcaagat gaagccaacc gcttgtcgcg tgattacgta gcgggggtta acttcctgct
0141 tagtaatcaa caggataaag cggtagacct gtttctcgat atgcttaaag aggatacagg caccgttgaa
0211 gcccacctta cgctcggaaa cctgttccgt tcgcgtggcg aagttgatcg cgctattcgc atccatcaga
0281 ccctaatgga aagcgcctcg ctgacctatg aacagcgtct gttggcgatt caacaactgg ggcgtgatta
0351 catggccgcc gggttatatg accgcgcgga agacatgttc aatcagctga ccgatgaaac tgacttccgc
0421 attggcgcgc tgcaacagtt gctacaaatc taccaggcta ccagtgagtg gcagaaagca attgatgttg
0491 ccgaacgcct ggtgaagctg ggtaaagata aacagcgcgt cgaaattgcc catttctact gtgagttagc
0561 cctgcagcat atggccagcg acgatctcga tcgtgccatg accttgctaa aaaaaggggc ggcggcagat
0631 aaaaacagcg cccgcgtatc cataatgatg ggacgcgtgt ttatggcgaa aggagaatac gccaaagccg
0701 tcgaaagtct gcaacgcgtg atatcccagg acagagaact ggtcagcgaa acgctggaaa tgttgcaaac
0771 ctgctatcag cagttgggta aaactgccga atgggcagaa ttcctgcagc gtgcggtgga agagaacacc
0841 ggtgccgatg ctgaattgat gcttgctgat atcatcgaag cgcgcgacgg tagtgaggcc gcacaggtct
0911 atattacgcg ccagcttcag cgtcatccga ccatgcgtgt gttccataag ttaatggatt accacttaaa
0981 tgaagcggaa gaagggcgtg ccaaagagag cctgatggtg ctgcgtgaca tggttggcga gaaggtacgt
1051 agtaagcctc gttatcgttg ccagaaatgt ggttttaccg catacaccct ctactggcat tgtccgtctt
1121 gtcgggcctg gtcaaccatt aaaccgattc gcggtcttga tggcctgtaa TTTTTAAAAA AAATCCGACT
1191 TTAGTTACAA CATACTAATT ATTAATGTTC CATTGTGCTC CGGCAACGAC GGCGCAGAAA AAGCCTGCCA
1261 GGGGAGAAAT
|
