|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
DE(tonB-cysB)206
,
OCR68,69-1
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yciE
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yciE
Search strains by all related name:
yciE b1257 ECK1251 JW1249
|
General information (Go to Linear View: )
|
|
Gene Name
|
yciE
|
|
Alternative name
|
b1257,ECK1251,JW1249
|
|
Location, Length
|
1,312,742 - 1,313,248
(
-
)
;
28.29
min
;
507
(bp) ,
168
(aa)
|
|
Product
|
putative rubrerythrin/ferritin-like metal-binding protein
|
|
Operon Name
|
yciGFE
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
GO:0005515
;
protein binding ( yciE )
GO:0016491
;
oxidoreductase activity ( yciE )
GO:0046914
;
transition metal ion binding ( yciE )
|
|
PID
|
1787511
|
EC number
(KEGG Pathway)
|
|
|
Verified Protein Starts
(data
compiled from literature and appropriate citations are available from EcoGene)
|
|
EcoGene
|
yciE
(
EG11125
)
|
|
Number of removed
|
0 aa cleaved
|
|
SWISS-PROT
(
Show details
[
1
more]
)
|
Entry name(Acc.no)
|
YCIE_ECOLI
(
P21363
)
|
|
- Protein name
|
Protein yciE.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yciE; OrderedLocusNames=b1257;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yciE
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, Ycfi, A Putative Structural Protein From Rhodopseudomonas Palustris.
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Protein yciE
|
|
PSI-BLAST
|
Protein yciE
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein b1257 [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MNRIEHYHDW LRDAHAMEKQ AESMLESMAS RIDNYPELRA RIEQHLSETK NQIVQLETIL DRNDISRSVI
0071 KDSMSKMAAL GQSIGGIFPS DEIVKGSISG YVFEQFEIAC YTSLLAAAKN AGDTASIPTI EAILNEEKQM
0141 ADWLIQNIPQ TTEKFLIRSE TDGVEAKK
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 actgactgat ctggccatta ataacgtaaa
-070 taagaaagcc gaaaataaag cctgaaatat gaattttaac ttttagtcat tttataaaga ggacattttc
0001 atgaatcgta ttgaacatta tcatgactgg ttacgtgacg cccacgcaat ggaaaagcaa gccgaatcta
0071 tgcttgaatc catggccagc cgtatagata attatcctga actacgcgct cgtattgaac aacatcttag
0141 tgaaaccaaa aaccagattg ttcaactgga aactattctt gatcgtaatg acatttcacg ttcagtcatt
0211 aaagattcca tgagtaaaat ggctgcgctt gggcagtcaa tcggtggtat attcccttct gatgaaatag
0281 tcaaaggctc tattagcgga tatgtcttcg agcaatttga aatcgcctgt tacacctcac tattagcagc
0351 agcaaaaaat gccggtgata cagcttcaat tccaaccatc gaagcgattt taaatgagga aaagcaaatg
0421 gccgactggc tgattcagaa tattccgcaa acaactgaga aatttttaat tcgctctgaa actgatggcg
0491 tagaagcgaa gaaataatac cctttatacc atgtccttat tgaccccgta tattacgggg tcgtttttgt
0561 gcggaattaa aaacgatatc ctgctgagaa cataaacacc cacggat
|
