|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCR68
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yciU
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yciU
Search strains by all related name:
yciU b1248 ECK1242 f135 JW1240
|
General information (Go to Linear View: )
|
|
Gene Name
|
yciU
|
|
Alternative name
|
b1248,ECK1242,f135,JW1240
|
|
Location, Length
|
1,304,845 - 1,305,174
(
-
)
;
28.12
min
;
330
(bp) ,
109
(aa)
|
|
Product
|
conserved protein, UPF0263 family
|
|
Operon Name
|
cls-yciU
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
GO:0005515
;
protein binding ( yciU )
|
|
PID
|
87081860
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YCIU_ECOLI
(
P76028
;
P76830; Q8XCC8
)
|
|
- Protein name
|
Hypothetical UPF0263 protein yciU.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yciU; OrderedLocusNames=b1248, c1712, z2024, ECs1748;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
yciU
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
Chain A, The Solution Structure Of Hi1450
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
UPF0263 protein yciU
|
|
PSI-BLAST
|
UPF0263 protein yciU
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
hypothetical protein c1712 [Escherichia coli CFT073]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Amino acid
FASTA format
|
0001 MDMDLNNRLT EDETLEQAYD IFLELAADNL DPADVLLFNL QFEERGGAEL FDPAEDWQEH VDFDLNPDFF
0071 AEVVIGLADS EDGEINDVFA RILLCREKDH KLCHIIWRE
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ctaaaacgtc cattatggca acgtgtcgcc
-070 gagcgactgt tttacttctt cagtccgttg ctgtaaaacg tcgccaacag aggttaaaca ggtagtaact
0001 atggatatgg atctaaacaa tcgcctgact gaagatgaaa cgcttgaaca ggcctacgat atttttctcg
0071 aactggctgc cgacaatctc gatccagctg atgttctgct gttcaatctt cagtttgaag agcgcggcgg
0141 cgcggagtta ttcgatccgg cggaagactg gcaggaacat gttgatttcg atttgaaccc ggactttttt
0211 gccgaagtgg tgattggtct ggcggacagt gaagatggtg aaatcaacga tgtttttgcc cgcattctgt
0281 tatgccgcga aaaagatcac aaactttgcc atatcatctg gcgggaataa ataatcgctt ttagcgtgaa
0351 aaagggctga caactgtcag cccttattgt ttttaaagcg gatcgacttt caggcaagaa acggagtgtc
0421 tgaaactccc
|
