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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
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Deletion
|
OCR68
(D)
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Related gene (W3110 PEC)
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Gene Search
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Search MG1655 PEC by gene name:
oppA
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Related strains
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Strains Search
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Search strains by gene name:
oppA
Search strains by all related name:
oppA b1243 ECK1237 JW1235
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General information (Go to Linear View: )
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Gene Name
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oppA
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Alternative name
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b1243,ECK1237,JW1235
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Location, Length
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1,299,206 - 1,300,837
(
+
)
;
28.00
min
;
1632
(bp) ,
543
(aa)
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Product
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oligopeptide transporter subunit
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Operon Name
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oppABCDF
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Note
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oligopeptide transport; periplasmic binding protein; periplasmic-binding component of ABC superfamily; GO_component: GO:0009274 - peptidoglycan-based cell wall; GO_component: GO:0042597 - periplasmic space; GO_process: GO:0000270 - peptidoglycan metabolic process; GO_process: GO:0006457 - protein folding
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Function
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transport; Protein, peptide secretion
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Gene Ontology
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GO:0005215
;
transporter activity ( oppA )
GO:0005515
;
protein binding ( oppA )
GO:0006810
;
transport ( oppA )
GO:0006857
;
oligopeptide transport ( oppA )
GO:0015031
;
protein transport ( oppA )
GO:0015198
;
oligopeptide transporter activity ( oppA )
GO:0042597
;
periplasmic space ( oppA )
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PID
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1787495
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EC number
(KEGG Pathway)
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Verified Protein Starts
(data
compiled from literature and appropriate citations are available from EcoGene)
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EcoGene
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oppA
(
EG10674
)
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Number of removed
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26 aa cleaved
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SWISS-PROT
(
Show details
[
2
more]
)
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Entry name(Acc.no)
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OPPA_ECOLI
(
P23843
;
P76829
)
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- Protein name
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Periplasmic oligopeptide-binding protein precursor.
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- Synonyms
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- Gene name
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Name=oppA; OrderedLocusNames=b1243;
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MMBR References
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J Bacteriol. 1985;161(2):484-92.
Genetic analysis of Escherichia coli oligopeptide transport mutants.
Andrews JC, Short SA.
(
2981814
)
|
J Bacteriol. 1983;153(3):1548-51.
Genetic organization of the oligopeptide permease (opp) locus of Salmonella typhimurium and Escherichia coli.
Hogarth BG, Higgins CF.
(
6338001
)
|
J Bacteriol. 1980;143(2):747-52.
Locations of the opp and supX genes of Salmonella typhimurium and Escherichia coli.
Lenny AB, Margolin P.
(
7009564
)
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J Bacteriol. 1993;175:7-11
Turnover and recycling of the murein sacculus in oligopeptide permease-negative strains of Escherichia coli: indirect evidence for an alternative permease system and for a monolayered sacculus.
Park, J. T.
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J Bacteriol. 1980;142(2):474-9.
Phaseolotoxin transport in Escherichia coli and Salmonella typhimurium via the oligopeptide permease.
Staskawicz BJ, Panopoulos NJ.
(
6991475
)
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| Sequences |
Amino acid
FASTA format
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0001 MTNITKRSLV AAGVLAALMA GNVALAADVP AGVTLAEKQT LVRNNGSEVQ SLDPHKIEGV PESNISRDLF
0071 EGLLVSDLDG HPAPGVAESW DNKDAKVWTF HLRKDAKWSD GTPVTAQDFV YSWQRSVDPN TASPYASYLQ
0141 YGHIAGIDEI LEGKKPITDL GVKAIDDHTL EVTLSEPVPY FYKLLVHPST SPVPKAAIEK FGEKWTQPGN
0211 IVTNGAYTLK DWVVNERIVL ERSPTYWNNA KTVINQVTYL PIASEVTDVN RYRSGEIDMT NNSMPIELFQ
0281 KLKKEIPDEV HVDPYLCTYY YEINNQKPPF NDVRVRTALK LGMDRDIIVN KVKAQGNMPA YGYTPPYTDG
0351 AKLTQPEWFG WSQEKRNEEA KKLLAEAGYT ADKPLTINLL YNTSDLHKKL AIAASSLWKK NIGVNVKLVN
0421 QEWKTFLDTR HQGTFDVARA GWCADYNEPT SFLNTMLSNS SMNTAHYKSP AFDSIMAETL KVTDEAQRTA
0491 LYTKAEQQLD KDSAIVPVYY YVNARLVKPW VGGYTGKDPL DNTYTRNMYI VKH
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 AACCTGACAG CAGAAAGTCT CCGAGCCTGT
-070 GCAGGGTCCC AATCCGGGAT TACACATGCT GGTTAATACC AGTAATTATA ATGAGGGAGT CCAAAAAACA
0001 atgaccaaca tcaccaagag aagtttagta gcagctggcg ttctggctgc gctaatggca gggaatgtcg
0071 cgctggcagc tgatgtaccc gcaggcgtca cactggcgga aaaacaaaca ctggtacgta acaatggttc
0141 agaagttcag tcattagatc cgcacaaaat tgaaggtgtt ccggagtcta atatcagccg agacctgttt
0211 gaaggcttac tggtcagcga tcttgacggt catccagcac ctggcgtcgc tgaatcctgg gataataaag
0281 acgcgaaagt ctggaccttc catttgcgta aagatgcgaa atggtctgat ggcacgccag tcacagcaca
0351 agactttgtg tatagctggc aacgttctgt tgatccgaac actgcttctc cgtatgccag ttatctgcaa
0421 tatgggcata tcgccggtat tgatgaaatt cttgaaggga aaaaaccgat taccgatctc ggcgtgaaag
0491 ctattgatga tcacacatta gaagtcacct taagtgaacc cgttccgtac ttctataaat tacttgttca
0561 cccatcaact tcaccggtgc caaaagccgc tatcgagaaa ttcggcgaaa aatggaccca gcctggtaat
0631 atcgtcacca acggtgccta taccttaaaa gattgggtcg taaacgaacg aatcgttctt gaacgcagcc
0701 cgacctactg gaacaacgcg aaaaccgtta ttaaccaggt aacctatttg cctattgctt ctgaagttac
0771 cgatgtcaac cgctaccgta gtggtgaaat cgacatgacg aataacagca tgccgatcga attgttccag
0841 aagctgaaaa aagagatccc ggacgaagtt cacgttgatc catacctgtg cacttactat tacgaaatta
0911 acaaccagaa accgccattc aacgatgtgc gtgtgcgtac cgcactgaaa ctaggtatgg accgcgatat
0981 cattgttaat aaagtgaaag cgcagggcaa catgcccgcc tatggttaca ctccaccgta tactgatggc
1051 gcaaaattga ctcagccaga atggtttggc tggagccagg aaaaacgtaa cgaagaagcg aaaaaactgc
1121 tggctgaagc gggttatacc gcagacaaac cgttgaccat caacctgttg tataacacct ccgatctgca
1191 taaaaagctg gcgattgctg cctcttcatt gtggaagaaa aacattggtg taaacgtcaa actggttaac
1261 caggagtgga aaacgttcct cgacacccgt caccagggta cttttgatgt ggcccgtgca ggctggtgtg
1331 ctgactacaa cgaaccaact tccttcctga acaccatgct ttcgaacagc tcgatgaata ccgcgcatta
1401 taagagcccg gcctttgaca gcattatggc ggaaacgctg aaagtgactg acgaggcgca gcgcacagct
1471 ctgtacacta aagcagaaca acagctggat aaggattcgg ccattgttcc tgtttattac tacgtgaatg
1541 cgcgtctggt gaaaccgtgg gttggtggct ataccggcaa agatccgctg gataatacct atacccggaa
1611 tatgtacatt gtgaagcact aaTGGCAATA CGTGGGGCAG GAGTGTCCTG CTCCACGGTG TCTGATTTTT
1681 ATCGCATTAC AGAAGGCACA GGCCAGAAGG TAGGGCAATG TTAAAATTTA TT
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