|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
ppdel-1
(LD)
,
OCR64
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
beeE
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
beeE
Search strains by all related name:
beeE b1151 ECK1137 JW1137 o157 o157b ymfO
|
General information (Go to Linear View: )
|
|
Gene Name
|
beeE
|
|
Alternative name
|
b1151,ECK1137,JW1137,o157,o157b,ymfO
|
|
Location, Length
|
1,204,954 - 1,205,365
(
+
)
;
25.97
min
;
412
(bp) ,
136
(aa)
|
|
Product
|
|
|
Operon Name
|
ymfTLMNROPQ-ycfK-ymfS
|
|
Note
|
pseudogene, portal protein family, e14 prophage;Phage or Prophage Related
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
|
EC number
(KEGG Pathway)
|
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YMFO_ECOLI
(
P75980
)
|
|
- Protein name
|
Hypothetical protein ymfO.
|
|
- Synonyms
|
|
|
- Gene name
|
Name=ymfO; OrderedLocusNames=b1151;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
ymfO
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Hypothetical protein ymfO
|
|
PSI-BLAST
|
Hypothetical protein ymfO
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
e14 prophage; conserved protein [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
ASN_GLYCOSYLATION
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 CGGCGGGTTT TGTTGTTGCC GGGGCGCTGT
-070 GCCTGTTCTG GTCGTGGCTG GTGGCGCGAT ATCTCGACCG TACACAGTCG TCTGTCGGCG GAGGTAAATA
0001 gtgttctttt cgggattatt tcaacgaaaa agtgacgcac cggtgaccac gccagcagag ctggcggatg
0071 ccatcgggct gtcgtatgac acctataccg gaaagcagat cagcagtcag cgggctatgc gactgacggc
0141 ggttttttcc tgcgtcagag tgctggcaga gtcggtcggg atgttgccct gcaatctgta tcacctgaac
0211 ggcagcctga agcagagagc caccggcgaa cgtctgcata aactgatctc cacgcatccc aatggctata
0281 tgacgccgca ggagttctgg gagctggtgg tcacctgtct gtgcctgagg ggaaactttt acgcctacaa
0351 agtgaaagca tttggcgaag tggctgaact gctgcccgtc gatcccggct gtgtggtata tgCGCTGGGA
0421 AGGTGTCAGC GATGGCCTGA AGGTGACCGC CGGGAGTGTT ATTCAGCGCG ATGACCTGGT GCAGTACACG
0491 ACAACTGACG ATGCAACCAG CT
|
