|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
2-1
(LD)
,
OCL10,16-3 (LD 2-1'_CRS)
(D)
,
OCL10,16-4 (LD 2-1'_P/O)
(D)
,
OCL13
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
bcsZ
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
bcsZ
Search strains by all related name:
bcsZ b1142 b3531 bcsC ECK3516 f103 f103c f368 JW3499 yhjM ymfH
|
General information (Go to Linear View: )
|
|
Gene Name
|
bcsZ
|
|
Alternative name
|
b1142,b3531,bcsC,ECK3516,f103,f103c,f368,JW3499,yhjM,ymfH
|
|
Location, Length
|
3,687,178 - 3,688,284
(
-
)
;
79.47
min
;
1107
(bp) ,
368
(aa)
|
|
Product
|
endo-1,4-D-glucanase
|
|
Operon Name
|
bcsABZC
|
|
Note
|
GO_component: GO:0005576 - extracellular region; GO_process: GO:0016052 - carbohydrate catabolic process; GO_process: GO:0000272 - polysaccharide catabolic process
|
|
Function
|
|
|
Gene Ontology
|
GO:0000272
;
polysaccharide catabolic process ( bcsZ )
GO:0003824
;
catalytic activity ( bcsZ )
GO:0004553
;
hydrolase activity, hydrolyzing O-glycosyl compounds ( bcsZ )
GO:0005488
;
binding ( bcsC )
GO:0005515
;
protein binding ( bcsZ )
GO:0005576
;
extracellular region ( bcsZ )
GO:0005975
;
carbohydrate metabolic process ( bcsZ )
GO:0008152
;
metabolic process ( bcsZ )
GO:0008810
;
cellulase activity ( bcsZ )
GO:0016787
;
hydrolase activity ( bcsZ )
GO:0016798
;
hydrolase activity, acting on glycosyl bonds ( bcsZ )
GO:0019867
;
outer membrane ( bcsC )
GO:0030244
;
cellulose biosynthetic process ( bcsC )
GO:0030245
;
cellulose catabolic process ( bcsZ )
|
|
PID
|
1789951
|
EC number
(KEGG Pathway)
|
3.2.1.4
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YB42_ECOLI
(
P75971
)
|
|
- Protein name
|
Very hypothetical 11.0 kDa protein in intE-pin intergenic region.
|
|
- Synonyms
|
|
|
- Gene name
|
OrderedLocusNames=b1142;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
ymfH
(
homologous genes of other bacterias
)
bcsZ
(
homologous genes of other bacterias
)
bcsC
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Very hypothetical 11.0 kDa protein in intE-pin intergenic region
|
|
PSI-BLAST
|
Very hypothetical 11.0 kDa protein in intE-pin intergenic region
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
e14 prophage; predicted protein [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
CAMP_PHOSPHO_SITE
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
AMIDATION
GLYCOSYL_HYDROL_F8
|
| Sequences |
Amino acid
FASTA format
|
0001 MNVLRSGIVT MLLLAAFSVQ AACTWPAWEQ FKKDYISQEG RVIDPSDARK ITTSEGQSYG MFSALAANDR
0071 AAFDNILDWT QNNLAQGSLK ERLPAWLWGK KENSKWEVLD SNSASDGDVW MAWSLLEAGR LWKEQRYTDI
0141 GSALLKRIAR EEVVTVPGLG SMLLPGKVGF AEDNSWRFNP SYLPPTLAQY FTRFGAPWTT LRETNQRLLL
0211 ETAPKGFSPD WVRYEKDKGW QLKAEKTLIS SYDAIRVYMW VGMMPDSDPQ KARMLNRFKP MATFTEKNGY
0281 PPEKVDVATG KAQGKGPVGF SAAMLPFLQN RDAQAVQRQR VADNFPGSDA YYNYVLTLFG QGWDQHRFRF
0351 STKGELLPDW GQECANSH
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 gctggcggct atcagtgtga tattgctggc
-070 atgggtactg tggcgtctgc tgcgaattat tagtcgtcgt cgtcttaacc cggataacga gtaattgaag
0001 atgaatgtgt tgcgtagtgg aatcgtgacg atgctgctgc tggctgcctt tagtgttcag gcagcctgta
0071 cctggcctgc ctgggagcag tttaaaaagg attacatcag tcaggaaggg cgcgtcatcg accccagcga
0141 cgcgcgcaaa atcaccacct ccgaagggca aagttacggc atgttctctg ccctggcggc taacgaccgt
0211 gcagctttcg ataatattct cgactggacg cagaacaatc tcgctcaggg ttctttaaaa gaacgtttgc
0281 ccgcctggct gtggggcaag aaagagaaca gtaagtggga agtgctggac agcaattcgg cctccgatgg
0351 tgatgtctgg atggcctggt cgttgctgga ggcggggcgt ttgtggaaag agcagcgtta taccgacatc
0421 ggcagcgcgt tgctaaaacg tatcgcgcgg gaggaagtgg tgacggtgcc tgggctgggt tccatgttgt
0491 taccgggcaa agtgggtttt gctgaggata acagctggcg ttttaacccc agctacctgc cgccgacgct
0561 ggcgcagtat ttcacccgct ttggcgcgcc gtggaccacg ctgcgcgaaa ccaatcaacg tttattgctg
0631 gaaaccgccc cgaaaggttt ttcgccagac tgggtgcgct atgagaaaga caaaggctgg cagctaaaag
0701 ccgaaaaaac attgatcagc agctacgacg ctatccgcgt ttacatgtgg gtaggcatga tgcctgacag
0771 cgatccgcaa aaagcgcgga tgctcaaccg gtttaaaccg atggcgacat tcactgagaa aaacggttat
0841 ccgccggaaa aagtggatgt ggctacgggg aaagcgcagg gtaaaggacc agtcggtttt tctgccgcca
0911 tgctgccctt tttacaaaac cgcgatgcgc aggccgttca gcgccagcgc gtggccgata actttcccgg
0981 cagcgatgcc tattacaact atgtgctgac cctgtttgga caaggctggg atcaacaccg tttccgcttc
1051 tcgacaaaag gtgagttatt acctgactgg ggccaggaat gcgcaaattc acactaaaca tattcacgct
1121 ttccctcggt ctggccgtca tgccgatggt cgaggcagca ccaaccgctc agcaacagtt gctggagcaa
1191 gttcggttag gcgaagc
|
