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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
|
|
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Deletion
|
OCR62-6
(D)
|
|
Related gene (W3110 PEC)
|
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Gene Search
|
Search MG1655 PEC by gene name:
nagK
|
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Related strains
|
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Strains Search
|
Search strains by gene name:
nagK
Search strains by all related name:
nagK b1119 ECK1105 JW1105 o303 o303b ycfX
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General information (Go to Linear View: )
|
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Gene Name
|
nagK
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Alternative name
|
b1119,ECK1105,JW1105,o303,o303b,ycfX
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|
Location, Length
|
1,177,816 - 1,178,727
(
+
)
;
25.39
min
;
912
(bp) ,
303
(aa)
|
|
Product
|
N-acetyl-D-glucosamine kinase
|
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Operon Name
|
nagK-cobB
|
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Note
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GO_process: GO:0006355 - regulation of transcription, DNA-dependent
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Function
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Gene Ontology
|
GO:0000166
;
nucleotide binding ( nagK )
GO:0005515
;
protein binding ( nagK )
GO:0005524
;
ATP binding ( nagK )
GO:0005975
;
carbohydrate metabolic process ( nagK )
GO:0006044
;
N-acetylglucosamine metabolic process ( nagK )
GO:0008270
;
zinc ion binding ( nagK )
GO:0009254
;
peptidoglycan turnover ( nagK )
GO:0016301
;
kinase activity ( nagK )
GO:0016740
;
transferase activity ( nagK )
GO:0045127
;
N-acetylglucosamine kinase activity ( nagK )
GO:0046872
;
metal ion binding ( nagK )
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PID
|
1787363
|
EC number
(KEGG Pathway)
|
2.7.1.59
|
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SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YCFX_ECOLI
(
P75959
)
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|
- Protein name
|
Hypothetical protein ycfX.
|
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- Synonyms
|
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- Gene name
|
Name=ycfX; OrderedLocusNames=b1119;
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Homology Analysis
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BLAST
|
|
Bacteria
|
|
GTOP
|
nagK
(
homologous genes of other bacterias
)
|
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PDB
(database updated :
2007.02.20
)
|
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PSI-BLAST
|
Chain A, Crystal Structure Of The Putative Regulatory Protein
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
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BLAST
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N-acetyl-D-glucosamine kinase (GlcNAc kinase)
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PSI-BLAST
|
Acetate kinase
|
|
nr
(database updated :
2007.02.20
)
|
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BLAST
|
N-acetyl-D-glucosamine kinase [Escherichia coli K12]
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|
Pfam 28.0
(database updated :
2015-05
)
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Pfam
|
|
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PROSITE
|
|
PROSITE
|
GLYCOSAMINOGLYCAN
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
MYRISTYL
ATP_GTP_A
RNP_1
ROK
|
| Sequences |
Amino acid
FASTA format
|
0001 MYYGFDIGGT KIALGVFDSG RQLQWEKRVP TPRDSYDAFL DAVCELVAEA DQRFGCKGSV GIGIPGMPET
0071 EDGTLYAANV PAASGKPLRA DLSARLDRDV RLDNDANCFA LSEAWDDEFT QYPLVMGLIL GTGVGGGLIF
0141 NGKPITGKSY ITGEFGHMRL PVDALTMMGL DFPLRRCGCG QHGCIENYLS GRGFAWLYQH YYHQPLQAPE
0211 IIALYDQGDE QARAHVERYL DLLAVCLGNI LTIVDPDLVV IGGGLSNFPA ITTQLADRLP RHLLPVARVP
0281 RIERARHGDA GGMRGAAFLH LTD
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 CTTTTGGCAA GTTGGTATCC GGCGCGGCGC
-070 GCCAGTAATA TTGACCCTGC GCGAGTCCTT AGCGGCCAGT AAAGGCAGTA CATTAAAACA AGGAGCGGCA
0001 atgtattacg ggtttgatat tggtggaaca aaaattgcgc ttggcgtgtt tgatagcggt cggcagttgc
0071 agtgggaaaa gcgggtgccg acaccgcgtg acagctatga cgcattttta gatgcagtgt gtgagctggt
0141 agctgaagct gaccaacgtt ttggctgtaa aggttctgtc ggcatcggta ttccgggaat gccggaaaca
0211 gaagatggta cgctgtatgc cgccaatgtc cccgctgcca gcggtaaacc gctgcgtgcc gacctgagcg
0281 cacgtcttga tcgcgatgta cgccttgata acgatgccaa ctgttttgcc ctttcagaag cctgggatga
0351 tgaatttact caatatccac tggtgatggg gttgattctc ggcaccggtg ttggcggcgg gctgattttc
0421 aacggcaaac cgattaccgg taaaagctac attaccggcg agtttggcca tatgcgtctg ccggttgatg
0491 cgttaaccat gatggggttg gatttcccgt tacgccgctg cggctgtggt cagcatggct gcattgaaaa
0561 ttatctgtct ggtcgcggtt ttgcgtggct gtatcaacac tattatcatc aaccgttgca ggctcccgaa
0631 attattgcgc tttatgatca aggcgatgag caggcaaggg cgcacgttga gcgttatctg gatttattag
0701 cggtttgtct gggaaatatc ctgaccatcg ttgaccctga cctggtcgtc attggtggtg gcttatcgaa
0771 tttcccggca atcacaacgc aactggcgga caggctgcct cgtcatctct tacctgtagc tcgtgttccg
0841 cgcattgaac gcgcgcgcca cggtgatgcg ggaggaatgc gtggtgcggc cttcctacat ctaaccgatt
0911 aaACAACAGA GGTTGCTATG CTGTCGCGTC GGGGTCATCG GTTAAGTCGT TTTCGTAAAA ATAAACGCCG
0981 CCTGCGCGAG CGTTTGCGTC AGCGTATTTT TT
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