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PEC Original Annotations
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|
Essentiality
|
|
Class
|
non-essential
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|
References (PMID)
|
|
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Deletion
|
OCR62-1
(D)
,
OCR62-6
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
thiK
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
thiK
Search strains by all related name:
thiK b1106 ECK1092 JW1092 o274 o274a ycfN
|
General information (Go to Linear View: )
|
|
Gene Name
|
thiK
|
|
Alternative name
|
b1106,ECK1092,JW1092,o274,o274a,ycfN
|
|
Location, Length
|
1,162,483 - 1,163,307
(
+
)
;
25.06
min
;
825
(bp) ,
274
(aa)
|
|
Product
|
thiamin kinase
|
|
Operon Name
|
hinT-ycfL-lpoB-thiK-nagZ-ycfP
|
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Note
|
putative beta-glucosidase
|
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Function
|
enzyme; Biosynthesis of cofactors, carriers: Thiamin
|
|
Gene Ontology
|
GO:0016301
;
kinase activity ( thiK )
GO:0016310
;
phosphorylation ( thiK )
GO:0016740
;
transferase activity ( thiK )
GO:0019165
;
thiamin kinase activity ( thiK )
|
|
PID
|
1787349
|
EC number
(KEGG Pathway)
|
2.7.1.89
|
|
SWISS-PROT
(
Show details
[
2
more]
)
|
Entry name(Acc.no)
|
YCFN_ECOLI
(
P75948
)
|
|
- Protein name
|
Hypothetical protein ycfN.
|
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- Synonyms
|
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- Gene name
|
Name=ycfN; OrderedLocusNames=b1106;
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
ycfN
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
Thiamine kinase
|
|
PSI-BLAST
|
Thiamine kinase
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
thiamin kinase [Escherichia coli K12]
|
|
Pfam 28.0
(database updated :
2015-05
)
|
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Pfam
|
|
|
PROSITE
|
|
PROSITE
|
PKC_PHOSPHO_SITE
CK2_PHOSPHO_SITE
TYR_PHOSPHO_SITE
MYRISTYL
|
|
MMBR References
|
J Bacteriol. 1982;151(2):708-17.
thiK and thiL loci of Escherichia coli.
Imamura N, Nakayama H.
(
6284709
)
|
J Bacteriol. 1984;160(2):711-7.
sn-Glycerol-3-phosphate auxotrophy of plsB strains of Escherichia coli: evidence that a second mutation, plsX, is required.
Larson TJ, Ludtke DN, Bell RM.
(
6094487
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MPFRSNNPIT RDELLSRFFP QYHPVTTFNS GLSGGSFLIE HQGQRFVVRQ PHDPDAPQSA FLRQYRALSQ
0071 LPACIAPKPH LYLRDWMVVD YLPGAVKTYL PDTNELAGLL YYLHQQPRFG WRITLLPLLE LYWQQSDPAR
0141 RTVGWLRMLK RLRKAREPRP LRLSPLHMDV HAGNLVHSAS GLKLIDWEYA GDGDIALELA AVWVENTEQH
0211 RQLVNDYATR AKIYPAQLWR QVRRWFPWLL MLKAGWFEYR WRQTGDQQFI RLADDTWRQL LIKQ
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TACGTGCTGT ACTCCAGCGC CTCTGGCAAC
-070 GTTAACGCTC CGACCCTACA AATGCAGCTG ATGCTGGTGC AGACGGGCGA AATTATCTGG TCAGGTAAAG
0001 gtgccgtttc gcagcaataa tcccatcacg cgcgacgaat tgctgtcgcg ctttttcccg cagtatcatc
0071 ccgtcacgac gtttaatagt gggcttagtg gcgggagttt tctcattgaa catcagggcc agcgttttgt
0141 tgtgcgtcag ccgcacgatc ctgatgcgcc gcagtccgcg ttcttgcgcc agtatcgggc tttatcacaa
0211 ctacccgcat gcattgcacc gaagccgcat ttatatctcc gtgactggat ggtagtcgac tatctgcccg
0281 gcgcggtaaa aacgtatttg ccggatacca acgaactggc aggcttgctg tattatctac atcaacaacc
0351 acgttttggc tggcgaataa cgctgttgcc gttactggaa ctgtactggc agcaaagcga tccggcgcgg
0421 cggacagtgg gttggctgcg aatgttaaaa cgtctgcgca aagcgcggga accacggcct ttacgcttaa
0491 gtccattgca tatggatgtc cacgccggaa atttagtgca tagcgcgtca gggttaaaac tcatcgactg
0561 ggagtatgcc ggagatggtg atatcgcgct ggaactggcg gcggtgtggg tggaaaatac tgaacagcac
0631 cggcaattgg tcaatgacta tgccactcgc gcgaagattt atccggcgca attatggcgt caggtcaggc
0701 gatggtttcc ctggctgctg atgctcaaag cagggtggtt tgagtaccgc tggcgacaaa ccggcgatca
0771 acaatttatc aggctggccg atgacacctg gcggcagcta ttaataaaac aataaGGAGA GCAGTGTGGG
0841 TCCAGTAATG TTGGATGTCG AAGGTTACGA ACTGGACGCG GAAGAGCGTG AAATACTGGC GCATCCGCTG
0911 GTGGGAGGGC TGATT
|
