|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
OCL29,30-6 (AK4-11 / BK5-11)
(D)
,
OCL30
(D)
,
OCL30-2
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yrbN
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yrbN
Search strains by all related name:
yrbN b4685 ECK4500 ibsD
|
General information (Go to Linear View: )
|
|
Gene Name
|
yrbN
|
|
Alternative name
|
b4685,ECK4500,ibsD
|
|
Location, Length
|
3,305,875 - 3,305,955
(
-
)
;
71.25
min
;
81
(bp) ,
26
(aa)
|
|
Product
|
hypothetical protein
|
|
Operon Name
|
yrbN-deaD
|
|
Note
|
expressed protein
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
226510977
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MKIADQFHDE LCRLAAINFE AHVLHG
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tacacatcag cccgtaatct tttttgattg
-070 ccatcacctt aacgggtgag ggcgttgttg ttcgttaata cacctacttt gagccggttc acacttttca
0001 atgaaaattg ctgatcaatt tcatgatgag ttatgtagac tggccgccat taattttgag gcacacgtac
0071 tacatggctg aattcgaaac cacttttgca gatctgggcc tgaaggctcc tatccttgaa gcccttaacg
0141 atctgggtta cgaaaaacca tctccaattc aggcagagtg t
|
