|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
DE(araA-leu)7697
,
OCR30
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
sgrT
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
sgrT
Search strains by all related name:
sgrT b4662 ECK4477
|
General information (Go to Linear View: )
|
|
Gene Name
|
sgrT
|
|
Alternative name
|
b4662,ECK4477
|
|
Location, Length
|
77,388 - 77,519
(
+
)
;
1.67
min
;
132
(bp) ,
43
(aa)
|
|
Product
|
Inhibitor of glucose uptake
|
|
Operon Name
|
sgrST-setA
|
|
Note
|
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
226510924
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MRQFYQHYFT ATAKLCWLRW LSVPQRLTML EGLMQWDDRN SES
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 AGCAGATGGC ATAAAAGGGG AACTCCTGTG
-070 CAAAAGACAG CAATTTTATT TTCCCTATAT TAAGTCAATA ATTCCTAACG ATGAAGCAAG GGGGTGCCCC
0001 atgcgtcagt tttatcagca ctattttacc gcgacagcga agttgtgctg gttgcgttgg ttaagcgtcc
0071 cacaacgatt aaccatgctt gaaggactga tgcagtggga tgaccgcaat tctgaaagtt gaCTTGCCTG
0141 CATCATGTGT GACTGAGTAT TGGTGTAAAA TCACCCGCCA GCAGATTATA CCTGCTGGTT TTTTTTATTC
0211 TCGCCGCGCT AAAAAGGGAA CG
|
