|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Deletion
|
9-1
(LD)
,
DE(gpt-lac)5
,
OCR36,37-6 (LD 9C::Ap)
(D)
|
|
Related gene (W3110 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
ykfH
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
ykfH
Search strains by all related name:
ykfH b4504 ECK0248 JW5956
|
General information (Go to Linear View: )
|
|
Gene Name
|
ykfH
|
|
Alternative name
|
b4504,ECK0248,JW5956
|
|
Location, Length
|
263,250 - 263,471
(
-
)
;
5.67
min
;
222
(bp) ,
73
(aa)
|
|
Product
|
hypothetical protein
|
|
Operon Name
|
yafY-ykfBF-yafX-ykfGH-yafW-ykfI
|
|
Note
|
GO_component: GO:0005737 - cytoplasm
|
|
Function
|
|
|
Gene Ontology
|
|
|
PID
|
87081704
|
EC number
(KEGG Pathway)
|
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
ykfH
(
homologous genes of other bacterias
)
|
|
PDB
(database updated :
2007.02.20
)
|
|
PSI-BLAST
|
|
|
SWISS-PROT
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
(database updated :
2007.02.20
)
|
|
BLAST
|
|
|
Pfam 28.0
(database updated :
2015-05
)
|
|
Pfam
|
|
|
PROSITE
|
|
PROSITE
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MKIISKRRAM TIYRQHPESR IFRYCTGKYQ WHGSVCHYTG RDVPDIAGVL AVYAERRQDR NGPYTCLMSI
0071 TLN
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 aggtgcttca gctggtggat atccgtgtcc
-070 ctgaccatct gattgtcggt ggcaggcaaa tctattcgtt cgcagaacac ggtctgcttt gaggtattac
0001 atgaaaatta tcagtaaacg cagggcaatg acgatatacc gccagcatcc tgagtcccga atctttcgct
0071 actgcaccgg caaataccag tggcacggta gcgtctgtca ttacaccggc agggacgttc cggatatcgc
0141 cggagtcctc gcggtatacg ccgaacgccg ccaggaccgc aatgggccct atacctgcct gatgagcatc
0211 accctgaact gacaatagtg gagaactgta atgagcaacc ctaccagggg cctgcagcgg gagattacac
0281 tgcgcctggg agcccgtctg gtgcaggaag gcaaccgact gc
|
